Publications

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2012
Dong, T., T. Kolev, R. Rieben, V. Dobrev, S. Tomov, and J. Dongarra, “Acceleration of the BLAST Hydro Code on GPU,” Supercomputing '12 (poster), Salt Lake City, Utah, SC12, November 2012.
Du, P., A. Bouteiller, G. Bosilca, T. Herault, and J. Dongarra, “Algorithm-Based Fault Tolerance for Dense Matrix Factorization,” Proceedings of the 17th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP 2012, New Orleans, LA, USA, ACM, pp. 225-234, February 2012.  (865.79 KB)
Baboulin, M., S. Donfack, J. Dongarra, L. Grigori, A. Remi, and S. Tomov, “A Class of Communication-Avoiding Algorithms for Solving General Dense Linear Systems on CPU/GPU Parallel Machines,” Proc. of the International Conference on Computational Science (ICCS), vol. 9, pp. 17-26, June 2012.
Dongarra, J., M. Faverge, T. Herault, J. Langou, and Y. Robert, “Hierarchical QR Factorization Algorithms for Multi-Core Cluster Systems,” IPDPS 2012, the 26th IEEE International Parallel and Distributed Processing Symposium, Shanghai, China, IEEE Computer Society Press, May 2012.  (405.71 KB)
Luszczek, P., J. Kurzak, and J. Dongarra, “Looking Back at Dense Linear Algebra Software,” Perspectives on Parallel and Distributed Processing: Looking Back and What's Ahead (to appear), 00 2012.  (235.91 KB)
Weaver, V. M., M. Johnson, K. Kasichayanula, J. Ralph, P. Luszczek, D. Terpstra, and S. Moore, “Measuring Energy and Power with PAPI,” International Workshop on Power-Aware Systems and Architectures, Pittsburgh, PA, September 2012.  (146.79 KB)
Bosilca, G., A. Bouteiller, E. Brunet, F. Cappello, J. Dongarra, A. Guermouche, T. Herault, Y. Robert, F. Vivien, and D. Zaidouni, “Unified Model for Assessing Checkpointing Protocols at Extreme-Scale,” University of Tennessee Computer Science Technical Report (also LAWN 269), no. UT-CS-12-697, June 2012.  (2.76 MB)
2011
Agullo, E., L. Giraud, A. Guermouche, A. Haidar, S. Lanteri, and J. Roman, “Algebraic Schwarz Preconditioning for the Schur Complement: Application to the Time-Harmonic Maxwell Equations Discretized by a Discontinuous Galerkin Method.,” The Twentieth International Conference on Domain Decomposition Methods, La Jolla, California, February 2011.
You, H., B. Rekapalli, Q. Liu, and S. Moore, “Autotuned Parallel I/O for Highly Scalable Biosequence Analysis,” TeraGrid'11, Salt Lake City, Utah, July 2011.  (275.34 KB)
Bouteiller, A., T. Herault, G. Bosilca, and J. Dongarra, “Correlated Set Coordination in Fault Tolerant Message Logging Protocols,” Proceedings of 17th International Conference, Euro-Par 2011, Part II, vol. 6853, Bordeaux, France, Springer, pp. 51-64, August 2011.  (486.68 KB)
Dongarra, J., M. Faverge, T. Herault, J. Langou, and Y. Robert, “Hierarchical QR Factorization Algorithms for Multi-Core Cluster Systems,” University of Tennessee Computer Science Technical Report (also Lawn 257), no. UT-CS-11-684, October 2011.  (405.71 KB)
Dongarra, J., P. Beckman, T. Moore, P. Aerts, G. Aloisio, J-C. Andre, D. Barkai, J-Y. Berthou, T. Boku, B. Braunschweig, et al., “The International Exascale Software Project Roadmap,” International Journal of High Performance Computing, vol. 25, no. 1, pp. 3-60, January 2011.  (719.74 KB)
Vetter, J., R. Glassbrook, J. Dongarra, K. Schwan, B. Loftis, S. McNally, J. Meredith, J. Rogers, P. Roth, K. Spafford, et al., “Keeneland: Bringing Heterogeneous GPU Computing to the Computational Science Community,” IEEE Computing in Science & Engineering, vol. 13, issue 5, pp. 90-95, August 2011.  (932.57 KB)
Vetter, J., R. Glassbrook, J. Dongarra, K. Schwan, B. Loftis, S. McNally, J. Meredith, J. Rogers, P. Roth, K. Spafford, et al., “Keeneland: Bringing Heterogeneous GPU Computing to the Computational Science Community,” IEEE Computing in Science & Engineering, vol. 13, issue 5, pp. 90-95, August 2011.  (932.57 KB)
Agullo, E., L. Giraud, A. Guermouche, A. Haidar, and J. Roman, “Parallel algebraic domain decomposition solver for the solution of augmented systems.,” Parallel, Distributed, Grid and Cloud Computing for Engineering, Ajaccio, Corsica, France, 12-15 April, 00 2011.
Agullo, E., C. Coti, T. Herault, J. Langou, S. Peyronnet, A.. Rezmerita, F. Cappello, and J. Dongarra, “QCG-OMPI: MPI Applications on Grids.,” Future Generation Computer Systems, vol. 27, no. 4, pp. 435-369, January 2011.  (1.48 MB)
Bosilca, G., T. Herault, A.. Rezmerita, and J. Dongarra, “On Scalability for MPI Runtime Systems,” University of Tennessee Computer Science Technical Report, no. ICL-UT-11-05, Knoxville, TN, May 2011.  (898.76 KB)
Bosilca, G., T. Herault, A.. Rezmerita, and J. Dongarra, “On Scalability for MPI Runtime Systems,” International Conference on Cluster Computing (CLUSTER), Austin, TX, USA, IEEEE, pp. 187-195, September 2011.  (898.76 KB)
Bosilca, G., T. Herault, P. Lemariner, J. Dongarra, and A.. Rezmerita, “Scalable Runtime for MPI: Efficiently Building the Communication Infrastructure,” Proceedings of Recent Advances in the Message Passing Interface - 18th European MPI Users' Group Meeting, EuroMPI 2011, vol. 6960, Santorini, Greece, Springer, pp. 342-344, September 2011.  (115.75 KB)
Moore, S., and J. Ralph, “User-Defined Events for Hardware Performance Monitoring,” Procedia Computer Science, vol. 4: Elsevier, pp. 2096-2104, May 2011.  (361.76 KB)
2010
Bosilca, G., A. Bouteiller, T. Herault, P. Lemariner, and J. Dongarra, “Dodging the Cost of Unavoidable Memory Copies in Message Logging Protocols,” Proceedings of EuroMPI 2010, Stuttgart, Germany, Springer, September 2010.  (202.87 KB)
Dongarra, J., M. Faverge, Y. Ishikawa, R. Namyst, F. Rue, and F. Trahay, “EZTrace: a generic framework for performance analysis,” ICL Technical Report, no. ICL-UT-11-01, December 2010.
Agullo, E., L. Giraud, A. Guermouche, A. Haidar, J. Roman, and Y. Lee-Tin-Yien, “MaPHyS or the Development of a Parallel Algebraic Domain Decomposition Solver in the Course of the Solstice Project,” Sparse Days 2010 Meeting at CERFACS, Toulouse, France, June 2010.
Agullo, E., C. Coti, T. Herault, J. Langou, S. Peyronnet, A.. Rezmerita, F. Cappello, and J. Dongarra, “QCG-OMPI: MPI Applications on Grids,” Future Generation Computer Systems, vol. 27, no. 4, pp. 357-369, March 2010.  (1.48 MB)
“Recent Advances in the Message Passing Interface, Lecture Notes in Computer Science (LNCS),” EuroMPI 2010 Proceedings, vol. 6305, Stuttgart, Germany, Springer, September 2010.
Agullo, E., C. Augonnet, J. Dongarra, H. Ltaeif, R. Namyst, R. Nath, J. Roman, S. Thibault, and S. Tomov, Scheduling Cholesky Factorization on Multicore Architectures with GPU Accelerators , Knoxville, TN, 2010 Symposium on Application Accelerators in High-Performance Computing (SAAHPC'10), Poster, July 2010.  (3.86 MB)
Agullo, E., L. Giraud, A. Guermouche, A. Haidar, and J. Roman, “Towards a Complexity Analysis of Sparse Hybrid Linear Solvers,” PARA 2010, Reykjavik, Iceland, June 2010.
2009
Supinski, B. R. de, S. Alam, D. Bailey, L. Carrington, C. Daley, A. Dubey, T. Gamblin, D. Gunter, P. D. Hovland, H. Jagode, et al., “Modeling the Office of Science Ten Year Facilities Plan: The PERI Architecture Tiger Team,” SciDAC 2009, Journal of Physics: Conference Series, vol. 180(2009)012039, San Diego, California, IOP Publishing, July 2009.  (906.39 KB)
Bouteiller, A., T. Ropars, G. Bosilca, C. Morin, and J. Dongarra, “Reasons for a Pessimistic or Optimistic Message Logging Protocol in MPI Uncoordinated Failure Recovery,” CLUSTER '09, New Orleans, IEEE, August 2009.  (191.36 KB)
Hoefler, T., Y-S. Dai, and J. Dongarra, “Towards Efficient MapReduce Using MPI,” Lecture Notes in Computer Science, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 16th European PVM/MPI Users' Group Meeting, vol. 5759, Espoo, Finland, Springer Berlin / Heidelberg, pp. 240-249, 00 2009.
Ramakrishan, L., D. Nurmi, A. Mandal, C. Koelbel, D. Gannon, M. Huang, Y-S. Kee, G. Obertelli, K. Thyagaraja, R. Wolski, et al., “VGrADS: Enabling e-Science Workflows on Grids and Clouds with Fault Tolerance,” SC’09 The International Conference for High Performance Computing, Networking, Storage and Analysis (to appear), Portland, OR, 00 2009.  (648.82 KB)
2008
Dongarra, J., S. Moore, G. D. Peterson, S. Tomov, J. Allred, V. Natoli, and D. Richie, “Exploring New Architectures in Accelerating CFD for Air Force Applications,” Proceedings of the DoD HPCMP User Group Conference, Seattle, Washington, January 2008.  (492.86 KB)
Hardt, M., K. Seymour, J. Dongarra, M. Zapf, and N. Ruiter, “Interactive Grid-Access Using Gridsolve and Giggle,” Computing and Informatics, vol. 27, no. 2, pp. 233-248,ISSN1335-9150, 00 2008.  (533.4 KB)
Dongarra, J., J-F. Pineau, Y. Robert, and F. Vivien, “Matrix Product on Heterogeneous Master Worker Platforms,” 2008 PPoPP Conference, Salt Lake City, Utah, January 2008.
Dongarra, J., J-F. Pineau, Y. Robert, Z. Shi, and F. Vivien, “Revisiting Matrix Product on Master-Worker Platforms,” International Journal of Foundations of Computer Science (IJFCS), vol. 19, no. 6, pp. 1317-1336, December 2008.  (248.66 KB)
Wolf, F., B. Wylie, E. Abraham, W. Frings, K. Fürlinger, M. Geimer, M-A. Hermanns, B. Mohr, S. Moore, and M. Pfeifer, “Usage of the Scalasca Toolset for Scalable Performance Analysis of Large-scale Parallel Applications,” Proceedings of the 2nd International Workshop on Tools for High Performance Computing, Stuttgart, Germany, Springer, pp. 157-167, January 2008.  (229.2 KB)
2007
Hoefler, T., J. M. Squyres, G. Fagg, G. Bosilca, W. Rehm, and A. Lumsdaine, “A New Approach to MPI Collective Communication Implementations,” Distributed and Parallel Systems: Springer US, pp. 45-54, 2007.  (140.2 KB)
Dongarra, J., J-F. Pineau, Y. Robert, Z. Shi, and F. Vivien, “Revisiting Matrix Product on Master-Worker Platforms,” International Journal of Foundations of Computer Science (IJFCS) (accepted), 00 2007.  (248.66 KB)
2006
Luszczek, P., D. Bailey, J. Dongarra, J. Kepner, R. Lucas, R. Rabenseifner, and D. Takahashi, “The HPC Challenge (HPCC) Benchmark Suite,” SC06 Conference Tutorial, Tampa, Florida, IEEE, November 2006.  (1.08 MB)
Keller, R., G. Bosilca, G. Fagg, M. Resch, and J. Dongarra, “Implementation and Usage of the PERUSE-Interface in Open MPI,” Euro PVM/MPI 2006, Bonn, Germany, September 2006.  (310.76 KB)
Demmel, J., J. Dongarra, B.. Parlett, W. Kahan, M. Gu, D. Bindel, Y. Hida, X. Li, O. Marques, J. E. Riedy, et al., “Prospectus for the Next LAPACK and ScaLAPACK Libraries,” PARA 2006, Umea, Sweden, June 2006.  (460.11 KB)
YarKhan, A., K. Seymour, K. Sagi, Z. Shi, and J. Dongarra, “Recent Developments in GridSolve,” International Journal of High Performance Computing Applications (Special Issue: Scheduling for Large-Scale Heterogeneous Platforms), vol. 20, no. 1: Sage Science Press, 00 2006.  (496.69 KB)
2005
Luszczek, P., J. Dongarra, D. Koester, R. Rabenseifner, B. Lucas, J. Kepner, J. McCalpin, D. Bailey, and D. Takahashi, Introduction to the HPC Challenge Benchmark Suite , March 2005.  (124.86 KB)
Berman, F., H. Casanova, A. Chien, K. Cooper, H. Dail, A. Dasgupta, W. Deng, J. Dongarra, L. Johnsson, K. Kennedy, et al., “New Grid Scheduling and Rescheduling Methods in the GrADS Project,” International Journal of Parallel Programming, vol. 33, no. 2: Springer, pp. 209-229, June 2005.  (306.41 KB)
Worley, P. H., J. Candy, L. Carrington, K. Huck, T. Kaiser, K. Mahinthakumar, A. D. Malony, S. Moore, D. Reed, P. C. Roth, et al., “Performance Analysis of GYRO: A Tool Evaluation,” In Proceedings of the 2005 SciDAC Conference, San Francisco, CA, June 2005.  (172.07 KB)
Worley, P. H., J. Candy, L. Carrington, K. Huck, T. Kaiser, K. Mahinthakumar, A. D. Malony, S. Moore, D. Reed, P. C. Roth, et al., “Performance Analysis of GYRO: A Tool Evaluation,” In Proceedings of the 2005 SciDAC Conference, San Francisco, CA, June 2005.  (172.07 KB)
Giraud, L., J. Langou, M. Rozložník, and J. van den Eshof, “Rounding Error Analysis of the Classical Gram-Schmidt Orthogonalization Process,” Numerische Mathematik, vol. 101, no. 1, pp. 87-100, January 2005.  (157.48 KB)
Vadhiyar, S., and J. Dongarra, “Self Adaptivity in Grid Computing,” Concurrency and Computation: Practice and Experience, Special Issue: Grid Performance, vol. 17, no. 2-4, pp. 235-257, 00 2005.  (394.66 KB)
2004
Chen, Z., J. Dongarra, P. Luszczek, and K. Roche, “LAPACK for Clusters Project: An Example of Self Adapting Numerical Software,” Proceedings of the 37th Annual Hawaii International Conference on System Sciences (HICSS 04'), vol. 9, Big Island, Hawaii, pp. 90282, January 2004.  (80.97 KB)
2003
Chen, Z., J. Dongarra, P. Luszczek, and K. Roche, “Self Adapting Software for Numerical Linear Algebra and LAPACK for Clusters,” Parallel Computing, vol. 29, no. 11-12, pp. 1723-1743, November 2003.  (343.44 KB)

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