Publications

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Conference Paper
Davis, J., T. Gao, S. Chandrasekaran, H. Jagode, A. Danalis, P. Balaji, J. Dongarra, and M. Taufer, Characterization of Power Usage and Performance in Data-Intensive Applications using MapReduce over MPI,” 2019 International Conference on Parallel Computing (ParCo2019), Prague, Czech Republic, September 2019.
Han, L., L-C. Canon, H. Casanova, Y. Robert, and F. Vivien, Checkpointing Workflows for Fail-Stop Errors,” IEEE Cluster, Honolulu, Hawaii, IEEE, September 2017.  (400.64 KB)
YarKhan, A., A. Haidar, C. Cao, P. Luszczek, S. Tomov, and J. Dongarra, Cholesky Across Accelerators,” 17th IEEE International Conference on High Performance Computing and Communications (HPCC 2015), Elizabeth, NJ, IEEE, August 2015.
Cao, C., J. Dongarra, P. Du, M. Gates, P. Luszczek, and S. Tomov, clMAGMA: High Performance Dense Linear Algebra with OpenCL ,” International Workshop on OpenCL, Bristol University, England, May 2014.  (460.91 KB)
Pei, Y., Q. Cao, G. Bosilca, P. Luszczek, V. Eijkhout, and J. Dongarra, Communication Avoiding 2D Stencil Implementations over PaRSEC Task-Based Runtime,” 21st IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC 2020), New Orleans, LA, IEEE, May 2020.  (1.33 MB)
Gates, M., S. Tomov, and A. Haidar, Comparing Hybrid CPU-GPU and Native GPU-only Acceleration for Linear Algebra,” 2015 SIAM Conference on Applied Linear Algebra, Atlanta, GA, SIAM, October 2015.  (4.7 MB)
Moore, S., A Comparison of Counting and Sampling Modes of Using Performance Monitoring Hardware,” International Conference on Computational Science (ICCS 2002), Amsterdam, Netherlands, Springer, April 2002. DOI: 10.1007/3-540-46080-2_95  (122 KB)
Baboulin, M., J. Dongarra, and R. Lacroix, Computing Least Squares Condition Numbers on Hybrid Multicore/GPU Systems,” International Interdisciplinary Conference on Applied Mathematics, Modeling and Computational Science (AMMCS), Waterloo, Ontario, CA, August 2014.  (130.18 KB)
Aupy, G., A. Benoit, L. Pottier, P. Raghavan, Y. Robert, and M. Shantharam, Co-Scheduling Algorithms for Cache-Partitioned Systems,” 19th Workshop on Advances in Parallel and Distributed Computational Models, Orlando, FL, IEEE Computer Society Press, May 2017. DOI: 10.1109/IPDPSW.2017.60  (584.76 KB)
Aupy, G., A. Benoit, B. Goglin, L. Pottier, and Y. Robert, Co-Scheduling HPC Workloads on Cache-Partitioned CMP Platforms,” Cluster 2018, Belfast, UK, IEEE Computer Society Press, September 2018.  (423.75 KB)
Danalis, A., H. Jagode, H. Hanumantharayappa, S. Ragate, and J. Dongarra, Counter Inspection Toolkit: Making Sense out of Hardware Performance Events,” 11th International Workshop on Parallel Tools for High Performance Computing, Dresden, Germany, Cham, Switzerland: Springer, February 2019. DOI: 10.1007/978-3-030-11987-4_2  (216.39 KB)
Conference Proceedings
Weaver, V. M., and J. Dongarra, Can Hardware Performance Counters Produce Expected, Deterministic Results?,” 3rd Workshop on Functionality of Hardware Performance Monitoring, Atlanta, GA, December 2010.  (392.71 KB)
Bland, W., P. Du, A. Bouteiller, T. Herault, G. Bosilca, and J. Dongarra, A Checkpoint-on-Failure Protocol for Algorithm-Based Recovery in Standard MPI,” 18th International European Conference on Parallel and Distributed Computing (Euro-Par 2012) (Best Paper Award), Rhodes, Greece, Springer-Verlag, August 2012.  (289.32 KB)
Baboulin, M., S. Donfack, J. Dongarra, L. Grigori, A. Remi, and S. Tomov, A Class of Communication-Avoiding Algorithms for Solving General Dense Linear Systems on CPU/GPU Parallel Machines,” Proc. of the International Conference on Computational Science (ICCS), vol. 9, pp. 17-26, June 2012.
Horton, M., S. Tomov, and J. Dongarra, A Class of Hybrid LAPACK Algorithms for Multicore and GPU Architectures,” Symposium for Application Accelerators in High Performance Computing (SAAHPC'11), Knoxville, TN, July 2011.  (329.68 KB)
Agullo, E., B. Hadri, H. Ltaeif, and J. Dongarra, Comparative Study of One-Sided Factorizations with Multiple Software Packages on Multi-Core Hardware,” 2009 International Conference for High Performance Computing, Networking, Storage, and Analysis (SC '09) (to appear), 00 2009.  (515.63 KB)
Tomov, S., J. Langou, A. Canning, L-W. Wang, and J. Dongarra, Comparison of Nonlinear Conjugate-Gradient methods for computing the Electronic Properties of Nanostructure Architectures,” Proceedings of 5th International Conference on Computational Science (ICCS), Atlanta, GA, USA, Springer's Lecture Notes in Computer Science, pp. 317-325, January 2005.  (172.86 KB)
Seymour, K., H. You, and J. Dongarra, A Comparison of Search Heuristics for Empirical Code Optimization,” The 3rd international Workshop on Automatic Performance Tuning, Tsukuba, Japan, October 2008.  (772.48 KB)
Fürlinger, K., and S. Moore, Continuous Runtime Profiling of OpenMP Applications,” Proceedings of the 2007 Conference on Parallel Computing (PARCO 2007), Juelich and Aachen, Germany, January 2007.  (408.01 KB)
Bouteiller, A., T. Herault, G. Bosilca, and J. Dongarra, Correlated Set Coordination in Fault Tolerant Message Logging Protocols,” Proceedings of 17th International Conference, Euro-Par 2011, Part II, vol. 6853, Bordeaux, France, Springer, pp. 51-64, August 2011.  (486.68 KB)
Jia, Y., P. Luszczek, G. Bosilca, and J. Dongarra, CPU-GPU Hybrid Bidiagonal Reduction With Soft Error Resilience,” ScalA '13 Proceedings of the Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems, Montpellier, France, November 2013.  (238.58 KB)
Jagode, H., and J. Hein, Custom assignment of MPI ranks for parallel multi-dimensional FFTs: Evaluation of BG/P versus BG/L,” Proceedings of the 2008 IEEE International Symposium on Parallel and Distributed Processing with Applications (ISPA-08), Sydney, Australia, IEEE Computer Society, pp. 271-283, January 2008.  (2.6 MB)
Journal Article
Fürlinger, K., and S. Moore, Capturing and Analyzing the Execution Control Flow of OpenMP Applications,” International Journal of Parallel Programming, vol. 37, no. 3, pp. 266-276, 00 2009.
Luszczek, P., J. Kurzak, and J. Dongarra, Changes in Dense Linear Algebra Kernels - Decades Long Perspective,” in Solving the Schrodinger Equation: Has everything been tried? (to appear): Imperial College Press, 00 2011.
Herault, T., Y. Robert, A. Bouteiller, D. Arnold, K. Ferreira, G. Bosilca, and J. Dongarra, Checkpointing Strategies for Shared High-Performance Computing Platforms,” International Journal of Networking and Computing, vol. 9, no. 1, pp. 28–52, 2019.  (490.5 KB)
Han, L., L-C. Canon, H. Casanova, Y. Robert, and F. Vivien, Checkpointing Workflows for Fail-Stop Errors,” IEEE Transactions on Computers, vol. 67, issue 8, pp. 1105–1120, August 2018.
Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, A Class of Parallel Tiled Linear Algebra Algorithms for Multicore Architectures,” Parallel Computing, vol. 35, pp. 38-53, 00 2009.  (274.74 KB)
Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, A Class of Parallel Tiled Linear Algebra Algorithms for Multicore Architectures,” Parallel Computing (to appear), 00 2010.  (612.23 KB)
Terpstra, D., H. Jagode, H. You, and J. Dongarra, Collecting Performance Data with PAPI-C,” Tools for High Performance Computing 2009, 3rd Parallel Tools Workshop, Dresden, Germany, Springer Berlin / Heidelberg, pp. 157-173, May 2010. DOI: 10.1007/978-3-642-11261-4_11  (4.45 MB)
Benoit, A., A. Cavelan, F. M. Ciorba, V. Le Fèvre, and Y. Robert, Combining Checkpointing and Replication for Reliable Execution of Linear Workflows with Fail-Stop and Silent Errors,” International Journal of Networking and Computing, vol. 9, no. 1, pp. 2-27.  (754.6 KB)
Ballard, G., D. Becker, J. Demmel, J. Dongarra, A. Druinsky, I. Peled, O. Schwartz, S. Toledo, and I. Yamazaki, Communication-Avoiding Symmetric-Indefinite Factorization,” SIAM Journal on Matrix Analysis and Application, vol. 35, issue 4, pp. 1364-1406, July 2014.  (593.18 KB)
Le Fèvre, V., T. Herault, Y. Robert, A. Bouteiller, A. Hori, G. Bosilca, and J. Dongarra, Comparing the Performance of Rigid, Moldable, and Grid-Shaped Applications on Failure-Prone HPC Platforms,” Parallel Computing, vol. 85, pp. 1–12, July 2019. DOI: 10.1016/j.parco.2019.02.002  (865.18 KB)
Graham, R. L., G. Bosilca, and J. Pjesivac–Grbovic, A Comparison of Application Performance Using Open MPI and Cray MPI,” Cray User Group, CUG 2007, May 2007.  (248.83 KB)
Arbenz, P., A. Cleary, J. Dongarra, and M. Hegland, A Comparison of Parallel Solvers for General Narrow Banded Linear Systems,” Parallel and Distributed Computing Practices, vol. 2, pp. 385-400, October 2002.  (304.96 KB)
Eijkhout, V., E. Fuentes, T. Eidson, and J. Dongarra, The Component Structure of a Self-Adapting Numerical Software System,” International Journal of Parallel Programming, vol. 33, no. 2, June 2005.  (64.88 KB)
Bosilca, G., A. Bouteiller, T. Herault, Y. Robert, and J. Dongarra, Composing Resilience Techniques: ABFT, Periodic, and Incremental Checkpointing,” International Journal of Networking and Computing, vol. 5, no. 1, pp. 2-15, January 2015.  (755.54 KB)
Haidar, A., H. Ltaeif, P. Luszczek, and J. Dongarra, A Comprehensive Study of Task Coalescing for Selecting Parallelism Granularity in a Two-Stage Bidiagonal Reduction,” IPDPS 2012, Shanghai, China, May 2012.  (480.43 KB)
Sun, J., J. Fu, J. Drake, Q. Zhu, A. Haidar, M. Gates, S. Tomov, and J. Dongarra, Computational Benefit of GPU Optimization for Atmospheric Chemistry Modeling,” Journal of Advances in Modeling Earth Systems, vol. 10, issue 8, pp. 1952–1969, August 2018. DOI: 10.1029/2018MS001276  (3.4 MB)
Sloot, P. M., D. Abramson, A. V. Bogdanov, J. Dongarra, A. Zomaya, and Y. Gorbachev, Computational Science — ICCS 2003,” Lecture Notes in Computer Science, vol. 2657-2660, ICCS 2003, International Conference. Melbourne, Australia, Springer-Verlag, Berlin, June 2003.
Computational Science – ICCS 2009, Proceedings of the 9th International Conference,” Lecture Notes in Computer Science: Theoretical Computer Science and General Issues, vol. -, no. 5544-5545, Baton Rouge, LA, May 2009.
Kaya, O., and Y. Robert, Computing Dense Tensor Decompositions with Optimal Dimension Trees,” Algorithmica, vol. 81, issue 5, pp. 2092–2121, May 2019. DOI: 10.1007/s00453-018-0525-3  (638.4 KB)
Yamazaki, I., S. Tomov, and J. Dongarra, Computing Low-rank Approximation of a Dense Matrix on Multicore CPUs with a GPU and its Application to Solving a Hierarchically Semiseparable Linear System of Equations,” Scientific Programming, 2015.  (648.87 KB)
Baboulin, M., J. Dongarra, S. Gratton, and J. Langou, Computing the Conditioning of the Components of a Linear Least Squares Solution,” VECPAR '08, High Performance Computing for Computational Science, Toulouse, France, January 2008.  (374.97 KB)
Baboulin, M., J. Dongarra, S. Gratton, and J. Langou, Computing the Conditioning of the Components of a Linear Least-squares Solution,” Numerical Linear Algebra with Applications, vol. 16, no. 7, pp. 517-533, 00 2009.  (374.97 KB)
Casanova, H., J. Herrmann, and Y. Robert, Computing the Expected Makespan of Task Graphs in the Presence of Silent Errors,” Parallel Computing, vol. 75, pp. 41–60, July 2018. DOI: 10.1016/j.parco.2018.03.004  (2.56 MB)
Chen, Z., and J. Dongarra, Condition Numbers of Gaussian Random Matrices,” SIAM Journal on Matrix Analysis and Applications (to appear), January 2005.  (186.46 KB)
Tomov, S., J. Langou, J. Dongarra, A. Canning, and L-W. Wang, Conjugate-Gradient Eigenvalue Solvers in Computing Electronic Properties of Nanostructure Architectures,” International Journal of Computational Science and Engineering, vol. 2, no. 3/4, pp. 205-212, 00 2006.  (428.21 KB)
Tomov, S., J. Langou, A. Canning, L-W. Wang, and J. Dongarra, Conjugate-Gradient Eigenvalue Solvers in Computing Electronic Properties of Nanostructure Architectures,” International Journal of Computational Science and Engineering (to appear), January 2005.  (428.21 KB)
Bosilca, G., C. Coti, T. Herault, P. Lemariner, and J. Dongarra, Constructing Resiliant Communication Infrastructure for Runtime Environments in Advances in Parallel Computing,” Advances in Parallel Computing - Parallel Computing: From Multicores and GPU's to Petascale, vol. 19, pp. 441-451, 2010. DOI: 10.3233/978-1-60750-530-3-441
Lemariner, P., G. Bosilca, C. Coti, T. Herault, and J. Dongarra, Constructing Resilient Communication Infrastructure for Runtime Environments,” ParCo 2009, Lyon France, September 2009.

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