Publications

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Journal Article
Doolin, D., J. Dongarra, and K. Seymour, JLAPACK - Compiling LAPACK Fortran to Java,” Scientific Programming, vol. 7, no. 2, pp. 111-138, October 2002.  (307.46 KB)
Ma, T., G. Bosilca, A. Bouteiller, and J. Dongarra, Kernel-assisted and topology-aware MPI collective communications on multi-core/many-core platforms,” Journal of Parallel and Distributed Computing, vol. 73, issue 7, pp. 1000-1010, July 2013. DOI: 10.1016/j.jpdc.2013.01.015  (1.4 MB)
Demmel, J., and J. Dongarra, LAPACK 2005 Prospectus: Reliable and Scalable Software for Linear Algebra Computations on High End Computers : LAPACK Working Note 164, January 2005.  (172.59 KB)
Anderson, E., Z. Bai, C. Bischof, S. Blackford, J. Demmel, J. Dongarra, J. Du Croz, A. Greenbaum, S. Hammarling, A. McKenney, et al., LAPACK Users' Guide, 3rd ed.,” Philadelphia: Society for Industrial and Applied Mathematics, January 1999.
Gustavson, F. G., J. Wasniewski, J. Dongarra, J. Herrero, and J. Langou, Level-3 Cholesky Factorization Routines Improve Performance of Many Cholesky Algorithms,” ACM Transactions on Mathematical Software (TOMS), vol. 39, issue 2, February 2013. DOI: 10.1145/2427023.2427026  (439.46 KB)
Gustavson, F. G., J. Wasniewski, and J. Dongarra, Level-3 Cholesky Kernel Subroutine of a Fully Portable High Performance Minimal Storage Hybrid Format Cholesky Algorithm,” ACM TOMS (submitted), also LAPACK Working Note (LAWN) 211, 00-2010.  (190.2 KB)
Dongarra, J., P. Luszczek, and A. Petitet, The LINPACK Benchmark: Past, Present, and Future,” Concurrency: Practice and Experience, vol. 15, pp. 803-820, 00-2008.  (94.86 KB)
Dongarra, J., LINPACK on Future Manycore and GPu Based Systems,” PARA 2010, Reykjavik, Iceland, June 2010.
Beck, M., D. Arnold, A. Bassi, F. Berman, H. Casanova, J. Dongarra, T. Moore, G. Obertelli, J. Plank, M. Swany, et al., Logistical Computing and Internetworking: Middleware for the Use of Storage in Communication,” submitted to SC2001, Denver, Colorado, November 2001.  (41.79 KB)
Beck, M., H. Casanova, J. Dongarra, T. Moore, J. Plank, F. Berman, and R. Wolski, Logistical Quality of Service in NetSolve,” Computer Communications, vol. 22, no. 11, pp. 1034-1044, January 1999.  (168.39 KB)
Bell, G., D. Bailey, A. H. Karp, J. Dongarra, and K. Walsh, A Look Back on 30 Years of the Gordon Bell Prize,” International Journal of High Performance Computing and Networking, vol. 31, issue 6, pp. 469–484, 2017.
Luszczek, P., J. Kurzak, and J. Dongarra, Looking Back at Dense Linear Algebra Software,” Perspectives on Parallel and Distributed Processing: Looking Back and What's Ahead (to appear), 00-2012.  (235.91 KB)
Luszczek, P., J. Kurzak, and J. Dongarra, Looking Back at Dense Linear Algebra Software,” Journal of Parallel and Distributed Computing, vol. 74, issue 7, pp. 2548–2560, July 2014. DOI: 10.1016/j.jpdc.2013.10.005  (1.79 MB)
Agullo, E., C. Augonnet, J. Dongarra, M. Faverge, J. Langou, H. Ltaeif, and S. Tomov, LU Factorization for Accelerator-Based Systems,” IEEE/ACS AICCSA 2011, Sharm-El-Sheikh, Egypt, December 2011.  (234.86 KB)
Kurzak, J., P. Luszczek, and J. Dongarra, LU Factorization with Partial Pivoting for a Multicore System with Accelerators,” IEEE Transactions on Parallel and Distributed Computing, vol. 24, issue 8, pp. 1613-1621, August 2013. DOI: http://doi.ieeecomputersociety.org/10.1109/TPDS.2012.242  (1.08 MB)
Strohmaier, E., J. Dongarra, H. Meuer, and H. D. Simon, The Marketplace for High-Performance Computers,” Parallel Computing, vol. 25, no. 13-14, pp. 1517-1545, October 2002.  (285.78 KB)
Agullo, E., G. Bosilca, C. Castagnède, J. Dongarra, H. Ltaeif, and S. Tomov, Matrices Over Runtime Systems at Exascale,” Supercomputing '12 (poster), Salt Lake City, Utah, November 2012.
Dongarra, J., Measuring Computer Performance: A Practioner's Guide,” SIAM Review (book review), vol. 43, no. 2, pp. 383-384, 00-2001.  (558.9 KB)
Dongarra, J., G. Fagg, R. Hempel, and D. W. Walker, Message Passing Software Systems,” Encyclopedia of Electrical and Engineering, Supplement 1: John Wiley & Sons, Inc., 00-2000.  (289.38 KB)
Beck, M., D. Arnold, A. Bassi, F. Berman, H. Casanova, J. Dongarra, T. Moore, G. Obertelli, J. Plank, M. Swany, et al., Middleware for the Use of Storage in Communication,” Parallel Computing, vol. 28, no. 12, pp. 1773-1788, August 2002.  (87.97 KB)
Buttari, A., J. Dongarra, J. Langou, J. Langou, P. Luszczek, and J. Kurzak, Mixed Precision Iterative Refinement Techniques for the Solution of Dense Linear Systems,” International Journal of High Performance Computer Applications (to appear), August 2007.  (157.4 KB)
Yamazaki, I., S. Tomov, and J. Dongarra, Mixed-Precision Cholesky QR Factorization and its Case Studies on Multicore CPU with Multiple GPUs,” SIAM Journal on Scientific Computing, vol. 37, no. 3, pp. C203-C330, May 2015. DOI: DOI:10.1137/14M0973773  (374.8 KB)
Faverge, M., J. Herrmann, J. Langou, B. Lowery, Y. Robert, and J. Dongarra, Mixing LU-QR Factorization Algorithms to Design High-Performance Dense Linear Algebra Solvers,” Journal of Parallel and Distributed Computing, vol. 85, pp. 32-46, November 2015. DOI: doi:10.1016/j.jpdc.2015.06.007  (5.06 MB)
Dongarra, J., A. Haidar, J. Kurzak, P. Luszczek, S. Tomov, and A. YarKhan, Model-Driven One-Sided Factorizations on Multicore, Accelerated Systems,” Supercomputing Frontiers and Innovations, vol. 1, issue 1, 2014. DOI: http://dx.doi.org/10.14529/jsfi1401  (1.86 MB)
Pjesivac–Grbovic, J., G. Fagg, T. Angskun, G. Bosilca, and J. Dongarra, MPI Collective Algorithm Selection and Quadtree Encoding,” Lecture Notes in Computer Science, vol. 4192, no. ICL-UT-06-13: Springer Berlin / Heidelberg, pp. 40-48, September 2006.  (308.39 KB)
Pjesivac–Grbovic, J., G. Bosilca, G. Fagg, T. Angskun, and J. Dongarra, MPI Collective Algorithm Selection and Quadtree Encoding,” Parallel Computing (Special Edition: EuroPVM/MPI 2006): Elsevier, 00-2007.  (308.39 KB)
Kurzak, J., P. Luszczek, A. YarKhan, M. Faverge, J. Langou, H. Bouwmeester, and J. Dongarra, Multithreading in the PLASMA Library,” Multi and Many-Core Processing: Architecture, Programming, Algorithms, & Applications: Taylor & Francis, 00-2013.  (536.28 KB)
Browne, S., J. Dongarra, J. Horner, P. McMahan, and S. Wells, National HPCC Software Exchange (NHSE): Uniting the High Performance Computing and Communications Community,” D-Lib Magazine, January 1998.  (56.15 KB)
Moore, K., and J. Dongarra, NetBuild: Transparent Cross-Platform Access to Computational Software Libraries,” Concurrency and Computation: Practice and Experience, Special Issue: Grid Computing Environments, vol. 14, no. 13-15, pp. 1445-1456, November 2002.  (74.84 KB)
Dongarra, J., G. H. Golub, C. Moler, and K. Moore, Netlib and NA-Net: building a scientific computing community,” In IEEE Annals of the History of Computing (to appear), August 2007.  (352.71 KB)
Dongarra, J., G. H. Golub, E. Grosse, C. Moler, and K. Moore, Netlib and NA-Net: Building a Scientific Computing Community,” IEEE Annals of the History of Computing, vol. 30, no. 2, pp. 30-41, January 2008.  (352.71 KB)
Seymour, K., A. YarKhan, S. Agrawal, and J. Dongarra, NetSolve: Grid Enabling Scientific Computing Environments,” Grid Computing and New Frontiers of High Performance Processing, no. 14: Elsevier, 00-2005.  (425 KB)
Agrawal, S., J. Dongarra, K. Seymour, and S. Vadhiyar, NetSolve: Past, Present, and Future - A Look at a Grid Enabled Server,” Making the Global Infrastructure a Reality: Wiley Publishing, 00-2003.  (158.19 KB)
Dongarra, J., Network-Enabled Solvers: A Step Toward Grid-Based Computing,” SIAM News, vol. 34, no. 10, December 2001.
Berman, F., H. Casanova, A. Chien, K. Cooper, H. Dail, A. Dasgupta, W. Deng, J. Dongarra, L. Johnsson, K. Kennedy, et al., New Grid Scheduling and Rescheduling Methods in the GrADS Project,” International Journal of Parallel Programming, vol. 33, no. 2: Springer, pp. 209-229, June 2005.  (306.41 KB)
Yamazaki, I., S. Tomov, and J. Dongarra, Non-GPU-resident Dense Symmetric Indefinite Factorization,” Concurrency and Computation: Practice and Experience, November 2016. DOI: 10.1002/cpe.4012
Dongarra, J., A Not So Simple Matter of Software,” NCSA Access Online: NCSA, 00-2005.  (457.69 KB)
Haidar, A., R. Solcà, M. Gates, S. Tomov, T. C. Schulthess, and J. Dongarra, A Novel Hybrid CPU-GPU Generalized Eigensolver for Electronic Structure Calculations Based on Fine Grained Memory Aware Tasks,” International Journal of High Performance Computing Applications, vol. 28, issue 2, pp. 196-209, May 2014. DOI: 10.1177/1094342013502097  (1.74 MB)
Solcà, R., A. Haidar, S. Tomov, J. Dongarra, and T. C. Schulthess, A Novel Hybrid CPU-GPU Generalized Eigensolver for Electronic Structure Calculations Based on Fine Grained Memory Aware Tasks,” Supercomputing '12 (poster), Salt Lake City, Utah, November 2012.
Petitet, A., S. Blackford, J. Dongarra, B. Ellis, G. Fagg, K. Roche, and S. Vadhiyar, Numerical Libraries and The Grid,” International Journal of High Performance Applications and Supercomputing, vol. 15, no. 4, pp. 359-374, January 2001.  (67.09 KB)
Browne, S., J. Dongarra, and A. Trefethen, Numerical Libraries and Tools for Scalable Parallel Cluster Computing,” International Journal of High Performance Applications and Supercomputing, vol. 15, no. 2, pp. 175-180, October 2002.  (37.38 KB)
Dongarra, J., S. Moore, and A. Trefethen, Numerical Libraries and Tools for Scalable Parallel Cluster Computing,” International Journal of High Performance Applications and Supercomputing, vol. 15, no. 2, pp. 175-180, January 2001.  (37.38 KB)
Browne, S., J. Dongarra, and A. Trefethen, Numerical Libraries and Tools for Scalable Parallel Cluster Computing,” IEEE Cluster Computing BOF at SC99, Portland, Oregon, January 1999.  (37.38 KB)
Dongarra, J., and V. Eijkhout, Numerical Linear Algebra,” Encyclopedia of Computer Science and Technology, eds. Kent, A., Williams, J., vol. 41, pp. 207-233, August 1999.  (262 KB)
Dongarra, J., and V. Eijkhout, Numerical Linear Algebra Algorithms and Software,” Journal of Computational and Applied Mathematics, vol. 123, no. 1-2, pp. 489-514, October 1999.  (258.62 KB)
Petitet, A., H. Casanova, C. Whaley, J. Dongarra, and Y. Robert, A Numerical Linear Algebra Problem Solving Environment Designer's Perspective (LAPACK Working Note 139),” SIAM Annual Meeting, Atlanta, GA, May 1999.  (319.71 KB)
Chaarawi, M., E. Gabriel, R. Keller, R. L. Graham, G. Bosilca, and J. Dongarra, OMPIO: A Modular Software Architecture for MPI I/O,” 18th EuroMPI, Santorini, Greece, Springer, pp. 81-89, September 2011.
Chaarawi, M., E. Gabriel, R. Keller, R. L. Graham, G. Bosilca, and J. Dongarra, OMPIO: A Modular Software Architecture for MPI I/O,” 18th EuroMPI, Santorini, Greece, Springer, pp. 81-89, September 2011.
Anzt, H., M. Kreutzer, E. Ponce, G. D. Peterson, G. Wellein, and J. Dongarra, Optimization and Performance Evaluation of the IDR Iterative Krylov Solver on GPUs,” The International Journal of High Performance Computing Applications, vol. 32, no. 2, pp. 220–230, March 2018. DOI: 10.1177/1094342016646844  (2.08 MB)
Shimosaka, H., T. Hiroyasu, M. Miki, and J. Dongarra, Optimization Problem Solving System Using GridRPC,” IEEE Transactions on Parallel and Distributed Systems (submitted), January 2005.  (740.57 KB)

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