Publications

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Conference Proceedings
Chen, Z., M. Yang, G. Francia, III, and J. Dongarra, Self Adapting Application Level Fault Tolerance for Parallel and Distributed Computing,” Proceedings of Workshop on Self Adapting Application Level Fault Tolerance for Parallel and Distributed Computing at IPDPS, pp. 1-8, March 2007.  (162.47 KB)
Demmel, J., J. Dongarra, V. Eijkhout, E. Fuentes, A. Petitet, R. Vuduc, C. Whaley, and K. Yelick, Self Adapting Linear Algebra Algorithms and Software,” IEEE Proceedings (to appear), 00 2004.  (587.67 KB)
Angskun, T., G. Bosilca, and J. Dongarra, Self-Healing in Binomial Graph Networks,” 2nd International Workshop On Reliability in Decentralized Distributed Systems (RDDS 2007), Vilamoura, Algarve, Portugal, November 2007.  (322.39 KB)
Angskun, T., G. Fagg, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, Self-Healing Network for Scalable Fault Tolerant Runtime Environments,” DAPSYS 2006, 6th Austrian-Hungarian Workshop on Distributed and Parallel Systems, Innsbruck, Austria, January 2006.  (162.83 KB)
Hiroyasu, T., M. Miki, K. Kodama, J. Uekawa, and J. Dongarra, A Simple Installation and Administration Tool for Large-scaled PC Cluster System,” ClusterWorld Conference and Expo, San Jose, CA, March 2003.  (275.97 KB)
Baboulin, M., S. Tomov, and J. Dongarra, Some Issues in Dense Linear Algebra for Multicore and Special Purpose Architectures,” PARA 2008, 9th International Workshop on State-of-the-Art in Scientific and Parallel Computing, Trondheim Norway, May 2008.
Hiroyasu, T., M. Miki, H. Saito, Y. Tanimura, and J. Dongarra, Static Scheduling for ScaLAPACK on the Grid Using Genetic Algorithm,” Information Processing Society of Japan Symposium Series, vol. 2003, no. 14, pp. 3-10, January 2003.  (506.42 KB)
Bouteiller, A., G. Bosilca, and M G. Venkata, Surviving Errors with OpenSHMEM,” OpenSHMEM and Related Technologies. Enhancing OpenSHMEM for Hybrid Environments, Baltimore, MD, USA, Springer International Publishing, pp. 66–81, 2016.
Aguilera, G., P. J. Teller, M. Taufer, and F. Wolf, A Systematic Multi-step Methodology for Performance Analysis of Communication Traces of Distributed Applications based on Hierarchical Clustering,” Proc. of the 5th International Workshop on Performance Modeling, Evaluation, and Organization of Parallel and Distributed Systems (PMEO-PDS 2006), no. ICL-UT-05-06, Rhodes Island, Greece, IEEE Computer Society, April 2006.  (1.02 MB)
Hadri, B., H. Ltaeif, E. Agullo, and J. Dongarra, Tile QR Factorization with Parallel Panel Processing for Multicore Architectures,” accepted in 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2010), Atlanta, GA, December 2009.
Hadri, B., E. Agullo, and J. Dongarra, Tile QR Factorization with Parallel Panel Processing for Multicore Architectures,” 24th IEEE International Parallel and Distributed Processing Symposium (submitted), 00 2010.  (313.98 KB)
Kennedy, K., J. Mellor-Crummey, K. Cooper, L. Torczon, F. Berman, A. Chien, D. Angulo, I. Foster, D. Gannon, L. Johnsson, et al., Toward a Framework for Preparing and Executing Adaptive Grid Programs,” International Parallel and Distributed Processing Symposium: IPDPS 2002 Workshops, Fort Lauderdale, FL, pp. 0171, April 2002.  (64.5 KB)
Canning, A., J. Dongarra, J. Langou, O. Marques, S. Tomov, C. Voemel, and L-W. Wang, Towards bulk based preconditioning for quantum dot computations,” IEEE/ACM Proceedings of HPCNano SC06 (to appear), January 2006.  (172.46 KB)
Wolf, F., A. D. Malony, S. Shende, and A. Morris, Trace-Based Parallel Performance Overhead Compensation,” In Proc. of the International Conference on High Performance Computing and Communications (HPCC), Sorrento (Naples), Italy, September 2005.  (306.88 KB)
Luszczek, P., H. Ltaeif, and J. Dongarra, Two-stage Tridiagonal Reduction for Dense Symmetric Matrices using Tile Algorithms on Multicore Architectures,” IEEE International Parallel and Distributed Processing Symposium (submitted), Anchorage, AK, May 2011.
Shamis, P.., M G. Venkata, M. G. Lopez, M.. B. Baker, O.. Hernandez, Y.. Itigin, M.. Dubman, G.. Shainer, R.. L. Graham, L.. Liss, et al., UCX: An Open Source Framework for HPC Network APIs and Beyond,” 2015 IEEE 23rd Annual Symposium on High-Performance Interconnects, Santa Clara, CA, USA, IEEE, pp. 40-43, 2015. DOI: 10.1109/HOTI.2015.13
Bosilca, G., A. Bouteiller, T. Herault, P. Lemariner, N. Ohm Saengpatsa, S. Tomov, and J. Dongarra, A Unified HPC Environment for Hybrid Manycore/GPU Distributed Systems,” IEEE International Parallel and Distributed Processing Symposium (submitted), Anchorage, AK, May 2011.
Wolf, F., B. Wylie, E. Abraham, W. Frings, K. Fürlinger, M. Geimer, M-A. Hermanns, B. Mohr, S. Moore, and M. Pfeifer, Usage of the Scalasca Toolset for Scalable Performance Analysis of Large-scale Parallel Applications,” Proceedings of the 2nd International Workshop on Tools for High Performance Computing, Stuttgart, Germany, Springer, pp. 157-167, January 2008.  (229.2 KB)
Bland, W., User Level Failure Mitigation in MPI,” Euro-Par 2012: Parallel Processing Workshops, vol. 7640, Rhodes Island, Greece, Springer Berlin Heidelberg, pp. 499-504, August 2012.  (136.15 KB)
Fürlinger, K., J. Dongarra, and M. Gerndt, On Using Incremental Profiling for the Performance Analysis of Shared Memory Parallel Applications,” Proceedings of the 13th International Euro-Par Conference on Parallel Processing (Euro-Par '07), Rennes, France, Springer LNCS, January 2007.
Anzt, H., J. Dongarra, G. Flegar, E. S. Quintana-Ortí, and A. E. Thomas, Variable-Size Batched Gauss-Huard for Block-Jacobi Preconditioning,” International Conference on Computational Science (ICCS 2017), vol. 108, Zurich, Switzerland, Procedia Computer Science, pp. 1783-1792, June 2017.
Ramakrishan, L., D. Nurmi, A. Mandal, C. Koelbel, D. Gannon, M. Huang, Y-S. Kee, G. Obertelli, K. Thyagaraja, R. Wolski, et al., VGrADS: Enabling e-Science Workflows on Grids and Clouds with Fault Tolerance,” SC’09 The International Conference for High Performance Computing, Networking, Storage and Analysis (to appear), Portland, OR, 00 2009.  (648.82 KB)
Fürlinger, K., and S. Moore, Visualizing the Program Execution Control Flow of OpenMP Applications,” Proc. 4th International Workshop on OpenMP (IWOMP 2008), West Lafayette, Indiana, Lecture Notes in Computer Science 5004, pp. 181-190, January 2008.  (194.25 KB)
Anzt, H., S. Tomov, J. Dongarra, and V. Heuveline, Weighted Block-Asynchronous Iteration on GPU-Accelerated Systems,” Tenth International Workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Platforms (Best Paper), Rhodes Island, Greece, August 2012.  (764.02 KB)
Haidar, A., Y. Jia, P. Luszczek, S. Tomov, A. YarKhan, and J. Dongarra, Weighted Dynamic Scheduling with Many Parallelism Grains for Offloading of Numerical Workloads to Multiple Varied Accelerators,” Proceedings of the 6th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems (ScalA'15), vol. No. 5, Austin, TX, ACM, November 2015.  (347.6 KB)
Journal Article
,” 15th European PVM/MPI Users' Group Meeting, Recent Advances in Parallel Virtual Machine and Message Passing Interface, Lecture Notes in Computer Science, vol. 5205, Dublin Ireland, Springer Berlin, January 2008.
Dongarra, J., V. Getov, and K. Walsh, The 30th Anniversary of the Supercomputing Conference: Bringing the Future Closer—Supercomputing History and the Immortality of Now,” Computer, vol. 51, issue 10, pp. 74–85, November 2018. DOI: 10.1109/MC.2018.3971352
Nath, R., S. Tomov, and J. Dongarra, Accelerating GPU Kernels for Dense Linear Algebra,” Proc. of VECPAR'10, Berkeley, CA, June 2010.  (615.07 KB)
Baboulin, M., J. Dongarra, J. Herrmann, and S. Tomov, Accelerating Linear System Solutions Using Randomization Techniques,” ACM Transactions on Mathematical Software (also LAWN 246), vol. 39, issue 2, February 2013. DOI: 10.1145/2427023.2427025  (358.79 KB)
Baboulin, M., J. Dongarra, J. Herrmann, and S. Tomov, Accelerating Linear System Solutions Using Randomization Techniques,” INRIA RR-7616 / LAWN #246 (presented at International AMMCS’11), Waterloo, Ontario, Canada, July 2011.  (358.79 KB)
Jagode, H., A. Danalis, and J. Dongarra, Accelerating NWChem Coupled Cluster through Dataflow-Based Execution,” The International Journal of High Performance Computing Applications, pp. 1–13, January 2017. DOI: 10.1177/1094342016672543  (4.07 MB)
Jagode, H., A. Danalis, and J. Dongarra, Accelerating NWChem Coupled Cluster through dataflow-based Execution,” The International Journal of High Performance Computing Applications, vol. 32, issue 4, pp. 540--551, July 2018. DOI: 10.1177/1094342016672543  (1.68 MB)
Anzt, H., M. Baboulin, J. Dongarra, Y. Fournier, F. Hulsemann, A. Khabou, and Y. Wang, Accelerating the Conjugate Gradient Algorithm with GPU in CFD Simulations,” VECPAR, 2016.
Tomov, S., R. Nath, and J. Dongarra, Accelerating the Reduction to Upper Hessenberg, Tridiagonal, and Bidiagonal Forms through Hybrid GPU-Based Computing,” Parallel Computing, vol. 36, no. 12, pp. 645-654, 00 2010.  (1.39 MB)
Dong, T., A. Haidar, S. Tomov, and J. Dongarra, Accelerating the SVD Bi-Diagonalization of a Batch of Small Matrices using GPUs,” Journal of Computational Science, vol. 26, pp. 237–245, May 2018. DOI: 10.1016/j.jocs.2018.01.007  (2.18 MB)
Gates, M., S. Tomov, and J. Dongarra, Accelerating the SVD Two Stage Bidiagonal Reduction and Divide and Conquer Using GPUs,” Parallel Computing, vol. 74, pp. 3–18, May 2018. DOI: 10.1016/j.parco.2017.10.004
Demmel, J., J. Dongarra, A. Fox, S. Williams, V. Volkov, and K. Yelick, Accelerating Time-To-Solution for Computational Science and Engineering,” SciDAC Review, 00 2009.  (739.11 KB)
Anzt, H., W. Sawyer, S. Tomov, P. Luszczek, and J. Dongarra, Acceleration of GPU-based Krylov solvers via Data Transfer Reduction,” International Journal of High Performance Computing Applications, 2015.
Dongarra, J., M. Faverge, H. Ltaeif, and P. Luszczek, Achieving numerical accuracy and high performance using recursive tile LU factorization with partial pivoting,” Concurrency and Computation: Practice and Experience, vol. 26, issue 7, pp. 1408-1431, May 2014. DOI: 10.1002/cpe.3110  (1.96 MB)
Moore, S., A.J.. Baker, J. Dongarra, C. Halloy, and C. Ng, Active Netlib: An Active Mathematical Software Collection for Inquiry-based Computational Science and Engineering Education,” Journal of Digital Information special issue on Interactivity in Digital Libraries, vol. 2, no. 4, 00 2002.  (182.59 KB)
Anzt, H., J. Dongarra, G. Flegar, N. J. Higham, and E. S. Quintana-Orti, Adaptive precision in block-Jacobi preconditioning for iterative sparse linear system solvers,” Concurrency and Computation: Practice and Experience, vol. 31, no. 6, pp. e4460, 2019. DOI: 10.1002/cpe.4460  (341.54 KB)
Anzt, H., J. Dongarra, G. Flegar, N. J. Higham, and E. S. Quintana-Ortí, Adaptive Precision in Block‐Jacobi Preconditioning for Iterative Sparse Linear System Solvers,” Concurrency Computation: Practice and Experience, March 2018. DOI: 10.1002/cpe.4460
Casanova, H., M H. Kim, J. Plank, and J. Dongarra, Adaptive Scheduling for Task Farming with Grid Middleware,” International Journal of Supercomputer Applications and High-Performance Computing, vol. 13, no. 3, pp. 231-240, October 2002.  (461.08 KB)
Bouteiller, A., T. Herault, G. Bosilca, P. Du, and J. Dongarra, Algorithm-based Fault Tolerance for Dense Matrix Factorizations, Multiple Failures, and Accuracy,” ACM Transactions on Parallel Computing, vol. 1, issue 2, no. 10, pp. 10:1-10:28, January 2015. DOI: 10.1145/2686892  (1.14 MB)
Chen, Z., and J. Dongarra, Algorithm-Based Fault Tolerance for Fail-Stop Failures,” IEEE Transactions on Parallel and Distributed Systems, vol. 19, no. 12, January 2008.  (340.49 KB)
Dongarra, J., G. Bosilca, R. Delmas, and J. Langou, Algorithmic Based Fault Tolerance Applied to High Performance Computing,” Journal of Parallel and Distributed Computing, vol. 69, pp. 410-416, 00 2009.  (313.55 KB)
Boulet, P., J. Dongarra, F. Rastello, Y. Robert, and F. Vivien, Algorithmic Issues on Heterogeneous Computing Platforms,” Parallel Processing Letters, vol. 9, no. 2, pp. 197-213, January 1999.  (301.17 KB)
Petitet, A., and J. Dongarra, Algorithmic Redistribution Methods for Block Cyclic Decompositions,” IEEE Transactions on Parallel and Distributed Computing, vol. 10, no. 12, pp. 201-220, October 2002.  (524.82 KB)
Masliah, I., A. Abdelfattah, A. Haidar, S. Tomov, M. Baboulin, J. Falcou, and J. Dongarra, Algorithms and Optimization Techniques for High-Performance Matrix-Matrix Multiplications of Very Small Matrices,” Parallel Computing, vol. 81, pp. 1–21, January 2019. DOI: 10.1016/j.parco.2018.10.003  (3.27 MB)

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