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2007

Wolf, F., B. Mohr, J. Dongarra, and S. Moore, “Automatic Analysis of Inefficiency Patterns in Parallel Applications,” Concurrency and Computation: Practice and Experience, vol. 19, no. 11, pp. 1481-1496, August 2007.

(233.31 KB)

Angskun, T., G. Bosilca, and J. Dongarra, “Binomial Graph: A Scalable and Fault- Tolerant Logical Network Topology,” Proceedings of The Fifth International Symposium on Parallel and Distributed Processing and Applications (ISPA07), Niagara Falls, Canada, Springer, August 2007.

(480.47 KB)

Dongarra, J., E. Jeannot, E. Saule, and Z. Shi, “Bi-objective Scheduling Algorithms for Optimizing Makespan and Reliability on Heterogeneous Systems,” 19th ACM Symposium on Parallelism in Algorithms and Architectures (SPAA) (submitted), San Diego, CA, June 2007.

(223.82 KB)

Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, “A Class of Parallel Tiled Linear Algebra Algorithms for Multicore Architectures,” University of Tennessee Computer Science Technical Report, no. UT-CS-07-600 (also LAPACK Working Note 191), January 2007.

(274.74 KB)

Graham, R. L., G. Bosilca, and J. Pjesivac–Grbovic, “A Comparison of Application Performance Using Open MPI and Cray MPI,” Cray User Group, CUG 2007, May 2007.

(248.83 KB)

Baboulin, M., J. Dongarra, S. Gratton, and J. Langou, “Computing the Conditioning of the Components of a Linear Least Squares Solution,” University of Tennessee Computer Science Technical Report, no. UT-CS-07-604, (also LAPACK Working Note 193), January 2007.

(374.97 KB)

Fürlinger, K., and S. Moore, “Continuous Runtime Profiling of OpenMP Applications,” Proceedings of the 2007 Conference on Parallel Computing (PARCO 2007), Juelich and Aachen, Germany, January 2007.

(408.01 KB)

Mellor-Crummey, J., P. Beckman, J. Dongarra, B. Miller, and K. Yelick, “Creating Software Technology to Harness the Power of Leadership-class Computing Systems,” DOE SciDAC Review (to appear), June 2007.

(617.02 KB)

Pjesivac–Grbovic, J., G. Bosilca, G. Fagg, T. Angskun, and J. Dongarra, “Decision Trees and MPI Collective Algorithm Selection Problem,” Euro-Par 2007, Rennes, France, Springer, pp. 105–115, August 2007.

(552.94 KB)

Dongarra, J., Z. Chen, G. Bosilca, and J. Langou, “Disaster Survival Guide in Petascale Computing: An Algorithmic Approach,” in Petascale Computing: Algorithms and Applications (to appear): Chapman & Hall - CRC Press, 00 2007.

(260.18 KB)

You, H., K. Seymour, J. Dongarra, and S. Moore, “Empirical Tuning of a Multiresolution Analysis Kernel using a Specialized Code Generator,” ICL Technical Report, no. ICL-UT-07-02, January 2007.

(123.34 KB)

Graham, R. L., R. Brightwell, B. Barrett, G. Bosilca, and J. Pjesivac–Grbovic, “An Evaluation of Open MPI's Matching Transport Layer on the Cray XT,” EuroPVM/MPI 2007, September 2007.

(369.01 KB)

Buttari, A., J. Dongarra, J. Kurzak, J. Langou, J. Langou, P. Luszczek, and S. Tomov, “Exploiting Mixed Precision Floating Point Hardware in Scientific Computations,” In High Performance Computing and Grids in Action (to appear), Amsterdam, IOS Press, 00 2007.

(122.01 KB)

Song, F., S. Moore, and J. Dongarra, “Feedback-Directed Thread Scheduling with Memory Considerations,” IEEE International Symposium on High Performance Distributed Computing, Monterey Bay, CA, June 2007.

(297.24 KB)

YarKhan, A., J. Dongarra, and K. Seymour, “GridSolve: The Evolution of Network Enabled Solver,” Grid-Based Problem Solving Environments: IFIP TC2/WG 2.5 Working Conference on Grid-Based Problem Solving Environments (Prescott, AZ, July 2006): Springer, pp. 215-226, 00 2007.

(377.48 KB)

Dongarra, J., and P. Luszczek, “High Performance Development for High End Computing with Python Language Wrapper (PLW),” International Journal for High Performance Computer Applications, vol. 21, no. 3, pp. 360-369, 00 2007.

(179.32 KB)

Dongarra, J., and P. Luszczek, “How Elegant Code Evolves With Hardware: The Case Of Gaussian Elimination,” in Beautiful Code Leading Programmers Explain How They Think: O'Reilly Media, Inc., June 2007.

(257 KB)

Dongarra, J., D. Gannon, G. Fox, and K. Kennedy, “The Impact of Multicore on Computational Science Software,” CTWatch Quarterly, vol. 3, issue 1, February 2007.

Kurzak, J., and J. Dongarra, “Implementation of Mixed Precision in Solving Systems of Linear Equations on the Cell Processor,” Concurrency and Computation: Practice and Experience, vol. 19, no. 10, pp. 1371-1385, July 2007.

(453.78 KB)

Jeannot, E., K. Seymour, A. YarKhan, and J. Dongarra, “Improved Runtime and Transfer Time Prediction Mechanisms in a Network Enabled Servers Middleware,” Parallel Processing Letters, vol. 17, no. 1, pp. 47-59, March 2007.

(718.4 KB)

Song, F., S. Moore, and J. Dongarra, “L2 Cache Modeling for Scientific Applications on Chip Multi-Processors,” Proceedings of the 2007 International Conference on Parallel Processing, Xi'an, China, IEEE Computer Society, January 2007.

(654.11 KB)

Buttari, A., J. Dongarra, and J. Kurzak, “Limitations of the Playstation 3 for High Performance Cluster Computing,” University of Tennessee Computer Science Technical Report, UT-CS-07-597 (Also LAPACK Working Note 185), 00 2007.

(171.01 KB)

Shende, S., A. D. Malony, S. Moore, and D. Cronk, “Memory Leak Detection in Fortran Applications using TAU,” Proc. DoD HPCMP Users Group Conference (HPCMP-UGC'07), Pittsburgh, PA, IEEE Computer Society, January 2007.

Buttari, A., J. Dongarra, J. Langou, J. Langou, P. Luszczek, and J. Kurzak, “Mixed Precision Iterative Refinement Techniques for the Solution of Dense Linear Systems,” International Journal of High Performance Computer Applications (to appear), August 2007.

(157.4 KB)

Pjesivac–Grbovic, J., G. Bosilca, G. Fagg, T. Angskun, and J. Dongarra, “MPI Collective Algorithm Selection and Quadtree Encoding,” Parallel Computing (Special Edition: EuroPVM/MPI 2006): Elsevier, 00 2007.

(308.39 KB)

Buttari, A., J. Dongarra, P. Husbands, J. Kurzak, and K. Yelick, “Multithreading for synchronization tolerance in matrix factorization,” Journal of Physics: Conference Series, SciDAC 2007, vol. 78, no. 2007, January 2007.

(577.73 KB)

Dongarra, J., G. H. Golub, C. Moler, and K. Moore, “Netlib and NA-Net: building a scientific computing community,” In IEEE Annals of the History of Computing (to appear), August 2007.

(352.71 KB)

Hoefler, T., J. M. Squyres, G. Fagg, G. Bosilca, W. Rehm, and A. Lumsdaine, “A New Approach to MPI Collective Communication Implementations,” Distributed and Parallel Systems: Springer US, pp. 45-54, 2007.

(140.2 KB)

Eijkhout, V., “Numerical Metadata API Reference,” Innovative Computing Laboratory Technical Report, February 2007.

(454.79 KB)

Angskun, T., G. Bosilca, B. Vander Zanden, and J. Dongarra, “Optimal Routing in Binomial Graph Networks,” The International Conference on Parallel and Distributed Computing, applications and Technologies (PDCAT), Adelaide, Australia, IEEE Computer Society, December 2007.

Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, “Parallel Tiled QR Factorization for Multicore Architectures,” University of Tennessee Computer Science Dept. Technical Report, UT-CS-07-598 (also LAPACK Working Note 190), 00 2007.

(277.92 KB)

Pjesivac–Grbovic, J., T. Angskun, G. Bosilca, G. Fagg, E. Gabriel, and J. Dongarra, “Performance Analysis of MPI Collective Operations,” Cluster computing, vol. 10, no. 2: Springer Netherlands, pp. 127-143, June 2007.

(1018.28 KB)

Dongarra, J., “Performance of Various Computers Using Standard Linear Equations Software (Linpack Benchmark Report),” University of Tennessee Computer Science Dept. Technical Report CS-89-85, 00 2007.

(6.42 MB)

Langou, J., Z. Chen, G. Bosilca, and J. Dongarra, “Recovery Patterns for Iterative Methods in a Parallel Unstable Environment,” SIAM SISC (to appear), May 2007.

(241.36 KB)

Angskun, T., G. Bosilca, G. Fagg, J. Pjesivac–Grbovic, and J. Dongarra, “Reliability Analysis of Self-Healing Network using Discrete-Event Simulation,” Proceedings of Seventh IEEE International Symposium on Cluster Computing and the Grid (CCGrid '07): IEEE Computer Society, pp. 437-444, May 2007.

Dongarra, J., and et al., “Remembering Ken Kennedy,” SciDAC Review, vol. 5, no. 2007, 00 2007.

(519.68 KB)

Supinski, B. R. de, J. K. Hollingsworth, S. Moore, and P. H. Worley, “Results of the PERI survey of SciDAC applications,” Journal of Physics: Conference Series, SciDAC 2007, vol. 78, no. 2007, January 2007.

(692.83 KB)

Bouteiller, A., G. Bosilca, and J. Dongarra, “Retrospect: Deterministic Relay of MPI Applications for Interactive Distributed Debugging,” Accepted for Euro PVM/MPI 2007: Springer, September 2007.

Dongarra, J., J-F. Pineau, Y. Robert, Z. Shi, and F. Vivien, “Revisiting Matrix Product on Master-Worker Platforms,” International Journal of Foundations of Computer Science (IJFCS) (accepted), 00 2007.

(248.66 KB)

Fürlinger, K., M. Gerndt, and J. Dongarra, “Scalability Analysis of the SPEC OpenMP Benchmarks on Large-Scale Shared Memory Multiprocessors,” Proceedings of the 2007 International Conference on Computational Science (ICCS 2007), vol. 4487-4490, Beijing, China, Springer LNCS, pp. 815-822, 2007.

(145.84 KB)

Buttari, A., P. Luszczek, J. Kurzak, J. Dongarra, and G. Bosilca, “SCOP3: A Rough Guide to Scientific Computing On the PlayStation 3,” University of Tennessee Computer Science Dept. Technical Report, UT-CS-07-595, 00 2007.

(1.74 MB)

Chen, Z., M. Yang, G. Francia, III, and J. Dongarra, “Self Adapting Application Level Fault Tolerance for Parallel and Distributed Computing,” Proceedings of Workshop on Self Adapting Application Level Fault Tolerance for Parallel and Distributed Computing at IPDPS, pp. 1-8, March 2007.

(162.47 KB)

Angskun, T., G. Bosilca, and J. Dongarra, “Self-Healing in Binomial Graph Networks,” 2nd International Workshop On Reliability in Decentralized Distributed Systems (RDDS 2007), Vilamoura, Algarve, Portugal, November 2007.

(322.39 KB)

Kurzak, J., A. Buttari, and J. Dongarra, “Solving Systems of Linear Equations on the CELL Processor Using Cholesky Factorization,” UT Computer Science Technical Report (Also LAPACK Working Note 184), no. UT-CS-07-596, January 2007.

(751.57 KB)

Gerndt, M., and K. Fürlinger, “Specification and detection of performance problems with ASL,” Concurrency and Computation: Practice and Experience, vol. 19, no. 11: John Wiley and Sons Ltd., pp. 1451-1464, January 2007.

Voemel, C., S. Tomov, L-W. Wang, O. Marques, and J. Dongarra, “The Use of Bulk States to Accelerate the Band Edge State Calculation of a Semiconductor Quantum Dot,” Journal of Computational Physics, vol. 223, pp. 774-782, 00 2007.

(452.6 KB)

Fürlinger, K., J. Dongarra, and M. Gerndt, “On Using Incremental Profiling for the Performance Analysis of Shared Memory Parallel Applications,” Proceedings of the 13th International Euro-Par Conference on Parallel Processing (Euro-Par '07), Rennes, France, Springer LNCS, January 2007.

2006

Chen, Z., and J. Dongarra, “Algorithm-Based Checkpoint-Free Fault Tolerance for Parallel Matrix Computations on Volatile Resources,” IPDPS 2006, 20th IEEE International Parallel and Distributed Processing Symposium, Rhodes Island, Greece, January 2006.

(266.54 KB)

Bhowmick, S., V. Eijkhout, Y. Freund, E. Fuentes, and D. Keyes, “Application of Machine Learning to the Selection of Sparse Linear Solvers,” International Journal of High Performance Computing Applications (submitted), 00 2006.

(392.96 KB)

Dongarra, J., N. Emad, and S. Abolfazl Shahzadeh-Fazeli, “An Asynchronous Algorithm on NetSolve Global Computing System,” Future Generation Computer Systems, vol. 22, issue 3, pp. 279-290, February 2006.

(568.92 KB)

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