Publications

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Conference Proceedings
Cronk, D., G. Fagg, S. Emeny, and S. Tucker, Dynamic Process Management for Pipelined Applications,” Proceedings of DoD HPCMP UGC 2005 (to appear), Nashville, TN, IEEE, January 2005.
Anzt, H., E. Chow, D. Szyld, and J. Dongarra, Domain Overlap for Iterative Sparse Triangular Solves on GPUs,” Software for Exascale Computing - SPPEXA, vol. 113: Springer International Publishing, pp. 527–545, September 2016. DOI: 10.1007/978-3-319-40528-5_24
Bosilca, G., A. Bouteiller, T. Herault, P. Lemariner, and J. Dongarra, Dodging the Cost of Unavoidable Memory Copies in Message Logging Protocols,” Proceedings of EuroMPI 2010, Stuttgart, Germany, Springer, September 2010.  (202.87 KB)
Arnold, D., and J. Dongarra, Developing an Architecture to Support the Implementation and Development of Scientific Computing Applications,” to appear in Proceedings of Working Conference 8: Software Architecture for Scientific Computing Applications, Ottawa, Canada, October 2000.  (176.25 KB)
Fürlinger, K., and S. Moore, Detection and Analysis of Iterative Behavior in Parallel Applications,” Proceedings of the 2008 International Conference on Computational Science (ICCS 2008), vol. 5103, Krakow, Poland, pp. 261-267, January 2008.  (141.02 KB)
Haidar, A., A. Abdelfattah, M. Zounon, P. Wu, S. Pranesh, S. Tomov, and J. Dongarra, The Design of Fast and Energy-Efficient Linear Solvers: On the Potential of Half-Precision Arithmetic and Iterative Refinement Techniques,” International Conference on Computational Science (ICCS 2018), vol. 10860, Wuxi, China, Springer, pp. 586–600, June 2018. DOI: 10.1007/978-3-319-93698-7_45
Luszczek, P., and J. Dongarra, Design of an Interactive Environment for Numerically Intensive Parallel Linear Algebra Calculations,” International Conference on Computational Science, Poland, Springer Verlag, June 2004. DOI: 10.1007/978-3-540-25944-2_35  (88.31 KB)
You, H., Q. Liu, Z. Li, and S. Moore, The Design of an Auto-tuning I/O Framework on Cray XT5 System,” Cray Users Group Conference (CUG'11) (Best Paper Finalist), Fairbanks, Alaska, May 2011.  (459.57 KB)
Roche, K., and J. Dongarra, Deploying Parallel Numerical Library Routines to Cluster Computing in a Self Adapting Fashion,” Parallel Computing: Advances and Current Issues:Proceedings of the International Conference ParCo2001, London, England, Imperial College Press, January 2002.  (381.89 KB)
Tomov, S., R. Nath, H. Ltaeif, and J. Dongarra, Dense Linear Algebra Solvers for Multicore with GPU Accelerators,” Parallel Distributed Processing, Workshops and Phd Forum (IPDPSW), 2010 IEEE International Symposium on, Atlanta, GA, pp. 1-8, 2010. DOI: 10.1109/IPDPSW.2010.5470941  (1 MB)
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Lemariner, and J. Dongarra, DAGuE: A Generic Distributed DAG Engine for High Performance Computing,” Proceedings of the Workshops of the 25th IEEE International Symposium on Parallel and Distributed Processing (IPDPS 2011 Workshops), Anchorage, Alaska, USA, IEEE, pp. 1151-1158, 00 2011.  (830.85 KB)
Jagode, H., and J. Hein, Custom assignment of MPI ranks for parallel multi-dimensional FFTs: Evaluation of BG/P versus BG/L,” Proceedings of the 2008 IEEE International Symposium on Parallel and Distributed Processing with Applications (ISPA-08), Sydney, Australia, IEEE Computer Society, pp. 271-283, January 2008.  (2.6 MB)
Jia, Y., P. Luszczek, G. Bosilca, and J. Dongarra, CPU-GPU Hybrid Bidiagonal Reduction With Soft Error Resilience,” ScalA '13 Proceedings of the Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems, Montpellier, France, November 2013.  (238.58 KB)
Bouteiller, A., T. Herault, G. Bosilca, and J. Dongarra, Correlated Set Coordination in Fault Tolerant Message Logging Protocols,” Proceedings of 17th International Conference, Euro-Par 2011, Part II, vol. 6853, Bordeaux, France, Springer, pp. 51-64, August 2011.  (486.68 KB)
Fürlinger, K., and S. Moore, Continuous Runtime Profiling of OpenMP Applications,” Proceedings of the 2007 Conference on Parallel Computing (PARCO 2007), Juelich and Aachen, Germany, January 2007.  (408.01 KB)
Seymour, K., H. You, and J. Dongarra, A Comparison of Search Heuristics for Empirical Code Optimization,” The 3rd international Workshop on Automatic Performance Tuning, Tsukuba, Japan, October 2008.  (772.48 KB)
Tomov, S., J. Langou, A. Canning, L-W. Wang, and J. Dongarra, Comparison of Nonlinear Conjugate-Gradient methods for computing the Electronic Properties of Nanostructure Architectures,” Proceedings of 5th International Conference on Computational Science (ICCS), Atlanta, GA, USA, Springer's Lecture Notes in Computer Science, pp. 317-325, January 2005.  (172.86 KB)
Agullo, E., B. Hadri, H. Ltaeif, and J. Dongarra, Comparative Study of One-Sided Factorizations with Multiple Software Packages on Multi-Core Hardware,” 2009 International Conference for High Performance Computing, Networking, Storage, and Analysis (SC '09) (to appear), 00 2009.  (515.63 KB)
Horton, M., S. Tomov, and J. Dongarra, A Class of Hybrid LAPACK Algorithms for Multicore and GPU Architectures,” Symposium for Application Accelerators in High Performance Computing (SAAHPC'11), Knoxville, TN, July 2011.  (329.68 KB)
Baboulin, M., S. Donfack, J. Dongarra, L. Grigori, A. Remi, and S. Tomov, A Class of Communication-Avoiding Algorithms for Solving General Dense Linear Systems on CPU/GPU Parallel Machines,” Proc. of the International Conference on Computational Science (ICCS), vol. 9, pp. 17-26, June 2012.
Bland, W., P. Du, A. Bouteiller, T. Herault, G. Bosilca, and J. Dongarra, A Checkpoint-on-Failure Protocol for Algorithm-Based Recovery in Standard MPI,” 18th International European Conference on Parallel and Distributed Computing (Euro-Par 2012) (Best Paper Award), Rhodes, Greece, Springer-Verlag, August 2012.  (289.32 KB)
Weaver, V. M., and J. Dongarra, Can Hardware Performance Counters Produce Expected, Deterministic Results?,” 3rd Workshop on Functionality of Hardware Performance Monitoring, Atlanta, GA, December 2010.  (392.71 KB)
Danalis, A., P. Luszczek, G. Marin, J. Vetter, and J. Dongarra, BlackjackBench: Hardware Characterization with Portable Micro-Benchmarks and Automatic Statistical Analysis of Results,” IEEE International Parallel and Distributed Processing Symposium (submitted), Anchorage, AK, May 2011.
Dongarra, J., E. Jeannot, E. Saule, and Z. Shi, Bi-objective Scheduling Algorithms for Optimizing Makespan and Reliability on Heterogeneous Systems,” 19th ACM Symposium on Parallelism in Algorithms and Architectures (SPAA) (submitted), San Diego, CA, June 2007.  (223.82 KB)
Angskun, T., G. Bosilca, and J. Dongarra, Binomial Graph: A Scalable and Fault- Tolerant Logical Network Topology,” Proceedings of The Fifth International Symposium on Parallel and Distributed Processing and Applications (ISPA07), Niagara Falls, Canada, Springer, August 2007.  (480.47 KB)
Anzt, H., E. Chow, T. Huckle, and J. Dongarra, Batched Generation of Incomplete Sparse Approximate Inverses on GPUs,” Proceedings of the 7th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems, pp. 49–56, November 2016. DOI: 10.1109/ScalA.2016.11
Anzt, H., J. Dongarra, G. Flegar, and E. S. Quintana-Ortí, Batched Gauss-Jordan Elimination for Block-Jacobi Preconditioner Generation on GPUs,” Proceedings of the 8th International Workshop on Programming Models and Applications for Multicores and Manycores, New York, NY, USA, ACM, pp. 1–10, February 2017. DOI: 10.1145/3026937.3026940  (552.62 KB)
Vadhiyar, S., G. Fagg, and J. Dongarra, Automatically Tuned Collective Communications,” Proceedings of SuperComputing 2000 (SC'2000), Dallas, TX, November 2000.  (232.69 KB)
Seymour, K., and J. Dongarra, Automatic Translation of Fortran to JVM Bytecode,” Joint ACM Java Grande - ISCOPE 2001 Conference (submitted), Stanford University, California, June 2001.  (185.8 KB)
Bhatia, N., F. Song, F. Wolf, J. Dongarra, B. Mohr, and S. Moore, Automatic Experimental Analysis of Communication Patterns in Virtual Topologies,” In Proceedings of the International Conference on Parallel Processing, Oslo, Norway, IEEE Computer Society, June 2005.  (227.13 KB)
Eidson, T., J. Dongarra, and V. Eijkhout, Applying Aspect-Oriented Programming Concepts to a Component-based Programming Model,” IPDPS 2003, Workshop on NSF-Next Generation Software, Nice, France, March 2003.  (66.99 KB)
Luszczek, P., and J. Dongarra, Anatomy of a Globally Recursive Embedded LINPACK Benchmark,” 2012 IEEE High Performance Extreme Computing Conference, Waltham, MA, pp. 1-6, September 2012. DOI: 10.1109/HPEC.2012.6408679  (204.74 KB)
Andersson, U., and P. Mucci, Analysis and Optimization of Yee_Bench using Hardware Performance Counters,” Proceedings of Parallel Computing 2005 (ParCo), Malaga, Spain, January 2005.  (72.27 KB)
Du, P., A. Bouteiller, G. Bosilca, T. Herault, and J. Dongarra, Algorithm-Based Fault Tolerance for Dense Matrix Factorization,” Proceedings of the 17th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP 2012, New Orleans, LA, USA, ACM, pp. 225-234, February 2012. DOI: 10.1145/2145816.2145845  (865.79 KB)
Chen, Z., and J. Dongarra, Algorithm-Based Checkpoint-Free Fault Tolerance for Parallel Matrix Computations on Volatile Resources,” IPDPS 2006, 20th IEEE International Parallel and Distributed Processing Symposium, Rhodes Island, Greece, January 2006.  (266.54 KB)
Agullo, E., L. Giraud, A. Guermouche, A. Haidar, S. Lanteri, and J. Roman, Algebraic Schwarz Preconditioning for the Schur Complement: Application to the Time-Harmonic Maxwell Equations Discretized by a Discontinuous Galerkin Method.,” The Twentieth International Conference on Domain Decomposition Methods, La Jolla, California, February 2011.
Song, F., F. Wolf, N. Bhatia, J. Dongarra, and S. Moore, An Algebra for Cross-Experiment Performance Analysis,” 2004 International Conference on Parallel Processing (ICCP-04), Montreal, Quebec, Canada, August 2004.  (166.12 KB)
Beck, M., J. Dongarra, J. Huang, T. Moore, and J. Plank, Active Logistical State Management in the GridSolve/L,” 4th International Symposium on Cluster Computing and the Grid (CCGrid 2004)(submitted), Chicago, Illinois, January 2004.  (123.69 KB)
8th International Conference on Parallel Processing and Applied Mathematics, Lecture Notes in Computer Science (LNCS),” PPAM 2009 Proceedings, vol. 6067, Wroclaw, Poland, Springer, September 2010.
Haidar, A., L. Giraud, H. Ben-Hadj-Ali, F. Sourbier, S. Operto, and J. Virieux, 3-D parallel frequency-domain visco-acoustic wave modelling based on a hybrid direct/iterative solver,” 73rd EAGE Conference & Exhibition incorporating SPE EUROPEC 2011, Vienna, Austria, 23-26 May, 00 2011.
,” 8th International Conference on Computational Science (ICCS), Proceedings Parts I, II, and III, Lecture Notes in Computer Science, vol. 5101, Krakow, Poland, Springer Berlin, January 2008.
,” 7th International parallel Processing and Applied Mathematics Conference, Lecture Notes in Comptuer Science, vol. 4967, Gdansk, Poland, Springer Berlin, January 2008.
Conference Paper
Jagode, H., A. Danalis, and J. Dongarra, What it Takes to keep PAPI Instrumental for the HPC Community,” 1st Workshop on Sustainable Scientific Software (CW3S19), Collegeville, Minnesota, July 2019.  (50.57 KB)
Haugen, B., S. Richmond, J. Kurzak, C. A. Steed, and J. Dongarra, Visualizing Execution Traces with Task Dependencies,” 2nd Workshop on Visual Performance Analysis (VPA '15), Austin, TX, ACM, November 2015.  (927.5 KB)
Kurzak, J., P. Luszczek, M. Gates, I. Yamazaki, and J. Dongarra, Virtual Systolic Array for QR Decomposition,” 15th Workshop on Advances in Parallel and Distributed Computational Models, IEEE International Parallel & Distributed Processing Symposium (IPDPS 2013), Boston, MA, IEEE, May 2013. DOI: 10.1109/IPDPS.2013.119  (749.84 KB)
Anzt, H., J. Dongarra, G. Flegar, and E. S. Quintana-Ortí, Variable-Size Batched LU for Small Matrices and Its Integration into Block-Jacobi Preconditioning,” 46th International Conference on Parallel Processing (ICPP), Bristol, United Kingdom, IEEE, August 2017. DOI: 10.1109/ICPP.2017.18
Anzt, H., J. Dongarra, G. Flegar, and T. Gruetzmacher, Variable-Size Batched Condition Number Calculation on GPUs,” SBAC-PAD, Lyon, France, September 2018.  (509.3 KB)
McCraw, H., A. Danalis, G. Bosilca, J. Dongarra, K. Kowalski, and T. Windus, Utilizing Dataflow-based Execution for Coupled Cluster Methods,” 2014 IEEE International Conference on Cluster Computing, no. ICL-UT-14-02, Madrid, Spain, IEEE, September 2014.  (260.23 KB)
Eberius, D., T. Patinyasakdikul, and G. Bosilca, Using Software-Based Performance Counters to Expose Low-Level Open MPI Performance Information,” EuroMPI, Chicago, IL, ACM, September 2017. DOI: 10.1145/3127024.3127039  (745.58 KB)
Dongarra, J., K. London, S. Moore, P. Mucci, and D. Terpstra, Using PAPI for Hardware Performance Monitoring on Linux Systems,” Conference on Linux Clusters: The HPC Revolution, Urbana, Illinois, Linux Clusters Institute, June 2001.  (422.35 KB)

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