Publications

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Journal Article
Heinrich, K., M. Berry, J. Dongarra, and S. Vadhiyar, The Semantic Conference Organizer,” Statistical Data Mining and Knowledge Discovery: CRC Press, 00 2003.  (998.12 KB)
Dongarra, J., M. Gates, A. Haidar, J. Kurzak, P. Luszczek, S. Tomov, and I. Yamazaki, The Singular Value Decomposition: Anatomy of Optimizing an Algorithm for Extreme Scale,” SIAM Review, vol. 60, issue 4, pp. 808–865, November 2018. DOI: 10.1137/17M1117732
Brady, T., A. Lastovetsky, K. Seymour, M. Guidolin, and J. Dongarra, SmartGridRPC: The new RPC model for high performance Grid Computing and Its Implementation in SmartGridSolve,” Concurrency and Computation: Practice and Experience (to appear), January 2010.  (1.08 MB)
Du, P., P. Luszczek, S. Tomov, and J. Dongarra, Soft Error Resilient QR Factorization for Hybrid System,” UT-CS-11-675 (also LAPACK Working Note #252), no. ICL-CS-11-675, July 2011.  (1.39 MB)
Du, P., P. Luszczek, S. Tomov, and J. Dongarra, Soft Error Resilient QR Factorization for Hybrid System with GPGPU,” Journal of Computational Science, Seattle, WA, Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems at SC11, November 2011.  (965.88 KB)
Du, P., P. Luszczek, S. Tomov, and J. Dongarra, Soft Error Resilient QR Factorization for Hybrid System with GPGPU,” Journal of Computational Science, vol. 4, issue 6, pp. 457–464, November 2013. DOI: http://dx.doi.org/10.1016/j.jocs.2013.01.004  (995.45 KB)
Baboulin, M., J. Dongarra, A. Remy, S. Tomov, and I. Yamazaki, Solving Dense Symmetric Indefinite Systems using GPUs,” Concurrency and Computation: Practice and Experience, vol. 29, issue 9, March 2017. DOI: 10.1002/cpe.4055  (1.94 MB)
Zaitsev, D., S. Tomov, and J. Dongarra, Solving Linear Diophantine Systems on Parallel Architectures,” IEEE Transactions on Parallel and Distributed Systems, vol. 30, issue 5, pp. 1158-1169, May 2019, 2018. DOI: http://dx.doi.org/10.1109/TPDS.2018.2873354
Kurzak, J., A. Buttari, and J. Dongarra, Solving Systems of Linear Equations on the CELL Processor Using Cholesky Factorization,” IEEE Transactions on Parallel and Distributed Systems, vol. 19, no. 9, pp. 1-11, January 2008.  (751.57 KB)
Vadhiyar, S., and J. Dongarra, SRS - A Framework for Developing Malleable and Migratable Parallel Software,” Parallel Processing Letters, vol. 13, no. 2, pp. 291-312, June 2003.  (211.6 KB)
Yamazaki, I., S. Tomov, and J. Dongarra, Stability and Performance of Various Singular Value QR Implementations on Multicore CPU with a GPU,” ACM Transactions on Mathematical Software (TOMS), vol. 43, issue 2, October 2016.
Voemel, C., S. Tomov, O. Marques, A. Canning, L-W. Wang, and J. Dongarra, State-of-the-Art Eigensolvers for Electronic Structure Calculations of Large Scale Nano-Systems,” Journal of Computational Physics, vol. 227, no. 15, pp. 7113-7124, January 2008.
Boulet, P., J. Dongarra, Y. Robert, and F. Vivien, Static Tiling for Heterogeneous Computing Platforms,” Parallel Computing, vol. 25, no. 5, pp. 547-568, January 1999.  (301.17 KB)
Casanova, H., M. G. Thomason, and J. Dongarra, Stochastic Performance Prediction for Iterative Algorithms in Distributed Environments,” Journal of Parallel and Distributed Computing, vol. 98, no. 1, pp. 68-91, October 2002.  (266.82 KB)
Casanova, H., M H. Kim, J. Plank, and J. Dongarra, Stochastic Performance Prediction for Iterative Algorithms in Distributed Environments,” Journal of Parallel and Distributed Computing, vol. 98, no. 1, pp. 68-91, January 1999.  (257.5 KB)
Yamazaki, I., S. Nooshabadi, S. Tomov, and J. Dongarra, Structure-aware Linear Solver for Realtime Convex Optimization for Embedded Systems,” IEEE Embedded Systems Letters, vol. 9, issue 3, pp. 61–64, May 2017. DOI: 10.1109/LES.2017.2700401  (339.11 KB)
Donfack, S., J. Dongarra, M. Faverge, M. Gates, J. Kurzak, P. Luszczek, and I. Yamazaki, A Survey of Recent Developments in Parallel Implementations of Gaussian Elimination,” Concurrency and Computation: Practice and Experience, vol. 27, issue 5, pp. 1292-1309, April 2015. DOI: 10.1002/cpe.3306  (783.45 KB)
Yamazaki, I., J. Kurzak, P. Wu, M. Zounon, and J. Dongarra, Symmetric Indefinite Linear Solver using OpenMP Task on Multicore Architectures,” IEEE Transactions on Parallel and Distributed Systems, vol. 29, issue 8, pp. 1879–1892, August 2018. DOI: 10.1109/TPDS.2018.2808964  (2.88 MB)
Dorris, J., A. YarKhan, J. Kurzak, P. Luszczek, and J. Dongarra, Task Based Cholesky Decomposition on Xeon Phi Architectures using OpenMP,” International Journal of Computational Science and Engineering (IJCSE), vol. 17, no. 3, October 2018. DOI: http://dx.doi.org/10.1504/IJCSE.2018.095851
Kennedy, K., B. Broom, K. Cooper, J. Dongarra, R. Fowler, D. Gannon, L. Johnsson, J. Mellor-Crummey, and L. Torczon, Telescoping Languages: A Strategy for Automatic Generation of Scientific Problem-Solving Systems from Annotated Libraries,” Journal of Parallel and Distributed Computing, vol. 61, no. 12, pp. 1803-1826, December 2001.  (386.37 KB)
Calland, P-Y., J. Dongarra, and Y. Robert, Tiling on Systems with Communication/Computation Overlap,” Concurrency: Practice and Experience, vol. 11, no. 3, pp. 139-153, January 1999.  (286.14 KB)
Strohmaier, E., H. Meuer, J. Dongarra, and H. D. Simon, The TOP500 List and Progress in High-Performance Computing,” IEEE Computer, vol. 48, issue 11, pp. 42-49, November 2015. DOI: doi:10.1109/MC.2015.338
Haidar, A., H. Ltaeif, and J. Dongarra, Toward High Performance Divide and Conquer Eigensolver for Dense Symmetric Matrices,” SIAM Journal on Scientific Computing (Accepted), July 2012.
Haidar, A., H. Ltaeif, and J. Dongarra, Toward High Performance Divide and Conquer Eigensolver for Dense Symmetric Matrices.,” Submitted to SIAM Journal on Scientific Computing (SISC), 00 2011.
Vadhiyar, S., G. Fagg, and J. Dongarra, Towards an Accurate Model for Collective Communications,” International Journal of High Performance Applications, Special Issue: Automatic Performance Tuning, vol. 18, no. 1, pp. 159-167, January 2004.  (250.73 KB)
Tomov, S., J. Dongarra, and M. Baboulin, Towards Dense Linear Algebra for Hybrid GPU Accelerated Manycore Systems,” Parallel Computing, vol. 36, no. 5-6, pp. 232-240, 00 2010.  (606.41 KB)
Hoefler, T., Y-S. Dai, and J. Dongarra, Towards Efficient MapReduce Using MPI,” Lecture Notes in Computer Science, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 16th European PVM/MPI Users' Group Meeting, vol. 5759, Espoo, Finland, Springer Berlin / Heidelberg, pp. 240-249, 00 2009.
Hoefler, T., Y-S. Dai, and J. Dongarra, Towards Efficient MapReduce Using MPI,” Lecture Notes in Computer Science, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 16th European PVM/MPI Users' Group Meeting, vol. 5759, Espoo, Finland, Springer Berlin / Heidelberg, pp. 240-249, 00 2009.
Jagode, H., A. Knuepfer, J. Dongarra, M. Jurenz, M. S. Mueller, and W. E. Nagel, Trace-based Performance Analysis for the Petascale Simulation Code FLASH,” International Journal of High Performance Computing Applications (to appear), 00 2010.  (887.54 KB)
Seymour, K., A. YarKhan, and J. Dongarra, Transparent Cross-Platform Access to Software Services using GridSolve and GridRPC,” in Cloud Computing and Software Services: Theory and Techniques (to appear): CRC Press, 00 2009.
Dongarra, J., Trends in High Performance Computing,” The Computer Journal, vol. 47, no. 4: The British Computer Society, pp. 399-403, 00 2004.  (455.96 KB)
Dongarra, J., A Tribute to Gene Golub,” Computing in Science and Engineering: IEEE, pp. 5, January 2008.
Yamazaki, I., T. Dong, R. Solcà, S. Tomov, J. Dongarra, and T. C. Schulthess, Tridiagonalization of a dense symmetric matrix on multiple GPUs and its application to symmetric eigenvalue problems,” Concurrency and Computation: Practice and Experience, October 2013.  (1.71 MB)
Hiroyasu, T., M. Miki, H. Shimosaka, M. Sano, Y. Tanimura, Y. Mimura, S. Yoshimura, and J. Dongarra, Truss Structural Optimization Using NetSolve System,” Meeting of the Japan Society of Mechanical Engineers, Kyoto University, Kyoto, Japan, October 2002.  (450.65 KB)
Du, P., M. Parsons, E. Fuentes, S-L. Shaw, and J. Dongarra, Tuning Principal Component Analysis for GRASS GIS on Multi-core and GPU Architectures,” FOSS4G 2010, Barcelona, Spain, September 2010.  (1.57 MB)
Bosilca, G., A. Bouteiller, E. Brunet, F. Cappello, J. Dongarra, A. Guermouche, T. Herault, Y. Robert, F. Vivien, and D. Zaidouni, Unified Model for Assessing Checkpointing Protocols at Extreme-Scale,” Concurrency and Computation: Practice and Experience, November 2013. DOI: 10.1002/cpe.3173  (894.61 KB)
Blackford, S., J. Demmel, J. Dongarra, I. Duff, S. Hammarling, G. Henry, M. Heroux, L. Kaufman, A. Lumsdaine, A. Petitet, et al., An Updated Set of Basic Linear Algebra Subprograms (BLAS),” ACM Transactions on Mathematical Software, vol. 28, no. 2, pp. 135-151, December 2002. DOI: 10.1145/567806.567807  (228.33 KB)
Anzt, H., E. Chow, J. Saak, and J. Dongarra, Updating Incomplete Factorization Preconditioners for Model Order Reduction,” Numerical Algorithms, vol. 73, issue 3, no. 3, pp. 611–630, February 2016. DOI: 10.1007/s11075-016-0110-2  (565.34 KB)
Voemel, C., S. Tomov, L-W. Wang, O. Marques, and J. Dongarra, The Use of Bulk States to Accelerate the Band Edge State Calculation of a Semiconductor Quantum Dot,” Journal of Computational Physics, vol. 223, pp. 774-782, 00 2007.  (452.6 KB)
Voemel, C., S. Tomov, L-W. Wang, O. Marques, and J. Dongarra, The use of bulk states to accelerate the band edge state calculation of a semiconductor quantum dot,” Journal of Computational Physics (submitted), January 2006.  (337.08 KB)
Chow, E., H. Anzt, J. Scott, and J. Dongarra, Using Jacobi Iterations and Blocking for Solving Sparse Triangular Systems in Incomplete Factorization Preconditioning,” Journal of Parallel and Distributed Computing, vol. 119, pp. 219–230, November 2018. DOI: 10.1016/j.jpdc.2018.04.017  (273.53 KB)
Tomov, S., M. Faverge, P. Luszczek, and J. Dongarra, Using MAGMA with PGI Fortran,” PGI Insider, November 2010.  (176.67 KB)
Buttari, A., J. Dongarra, J. Kurzak, P. Luszczek, and S. Tomov, Using Mixed Precision for Sparse Matrix Computations to Enhance the Performance while Achieving 64-bit Accuracy,” ACM Transactions on Mathematical Software, vol. 34, no. 4, pp. 17-22, 00 2008.  (364.48 KB)
Anzt, H., J. Dongarra, G. Flegar, and E. S. Quintana-Ortí, Variable-Size Batched Gauss–Jordan Elimination for Block-Jacobi Preconditioning on Graphics Processors,” Parallel Computing, January 2018. DOI: 10.1016/j.parco.2017.12.006  (1.9 MB)
Casanova, H., T. Bartol, F. Berman, A. Birnbaum, J. Dongarra, M. Ellisman, M. Faerman, E. Gockay, M. Miller, G. Obertelli, et al., The Virtual Instrument: Support for Grid-enabled Scientific Simulations,” International Journal of High Performance Computing Applications, vol. 18, no. 1, pp. 3-17, January 2004.  (282.16 KB)
Casanova, H., T. Bartol, F. Berman, A. Birnbaum, J. Dongarra, M. Ellisman, M. Faerman, E. Gockay, M. Miller, G. Obertelli, et al., The Virtual Instrument: Support for Grid-enabled Scientific Simulations,” Journal of Parallel and Distributed Computing (submitted), October 2002.  (282.16 KB)
Lee, DW., and J. Dongarra, VisPerf: Monitoring Tool for Grid Computing,” Lecture Notes in Computer Science, vol. 2659: Springer Verlag, Heidelberg, pp. 233-243, 00 2003.  (835.09 KB)
Anzt, H., J. Dongarra, and V. Heuveline, Weighted Block-Asynchronous Relaxation for GPU-Accelerated Systems,” SIAM Journal on Computing (submitted), March 2012.  (811.01 KB)
Miscellaneous
Reed, D., and J. Dongarra, Exascale Computing and Big Data,” Communications of the ACM, vol. 58, no. 7: ACM, pp. 56-68, July 2015. DOI: 10.1145/2699414  (7.3 MB)
Dongarra, J., The HPL Benchmark: Past, Present & Future , ISC High Performance, Frankfurt, Germany, July 2016.  (3.41 MB)

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