Publications

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Book Chapter
Parker, S., J. Mellor-Crummey, D. H. Ahn, H. Jagode, H. Brunst, S. Shende, A. D. Malony, D. DelSignore, R. Tschuter, R. Castain, et al., Performance Analysis and Debugging Tools at Scale,” Exascale Scientific Applications: Scalability and Performance Portability: Chapman & Hall / CRC Press, pp. 17-50, 2017-11. DOI: 10.1201/b21930
Conference Paper
Jagode, H., A. Danalis, G. Bosilca, and J. Dongarra, Accelerating NWChem Coupled Cluster through dataflow-based Execution,” 11th International Conference on Parallel Processing and Applied Mathematics (PPAM 2015), Krakow, Poland, Springer International Publishing, 2015-09.  (452.82 KB)
Danalis, A., H. Jagode, H. Hanumantharayappa, S. Ragate, and J. Dongarra, Counter Inspection Toolkit: Making Sense out of Hardware Performance Event,” 11th International Workshop on Parallel Tools for High Performance Computing, Dresden, Germany, Cham, Switzerland: Springer, 2019-09.  (216.39 KB)
Maloney, A., S. Biersdorff, S. Shende, H. Jagode, S. Tomov, G. Juckeland, R. Dietrich, D. Poole, and C. Lamb, Parallel Performance Measurement of Heterogeneous Parallel Systems with GPUs,” International Conference on Parallel Processing (ICPP'11), Taipei, Taiwan, ACM, 20November 09. DOI: 10.1109/ICPP.2011.71  (1.41 MB)
Danalis, A., H. Jagode, G. Bosilca, and J. Dongarra, PaRSEC in Practice: Optimizing a Legacy Chemistry Application through Distributed Task-Based Execution,” 2015 IEEE International Conference on Cluster Computing, Chicago, IL, IEEE, 2015-09.  (1.77 MB)
Haidar, A., H. Jagode, A. YarKhan, P. Vaccaro, S. Tomov, and J. Dongarra, Power-aware Computing: Measurement, Control, and Performance Analysis for Intel Xeon Phi,” 2017 IEEE High Performance Extreme Computing Conference (HPEC'17), Best Paper Finalist, Waltham, MA, IEEE, 2017-09.  (908.84 KB)
Danalis, A., H. Jagode, T. Herault, P. Luszczek, and J. Dongarra, Software-Defined Events through PAPI,” 24th International Workshop on High-Level Parallel Programming Models and Supportive Environments (HIPS), Rio de Janeiro, Brazil, IEEE, 2019-05.  (446.41 KB)
Jagode, H., A. Danalis, and J. Dongarra, What it Takes to keep PAPI Instrumental for the HPC Community,” 1st Workshop on Sustainable Scientific Software (CW3S19), Collegeville, Minnesota, 2019-07.  (50.57 KB)
Conference Proceedings
Jagode, H., and J. Hein, Custom assignment of MPI ranks for parallel multi-dimensional FFTs: Evaluation of BG/P versus BG/L,” Proceedings of the 2008 IEEE International Symposium on Parallel and Distributed Processing with Applications (ISPA-08), Sydney, Australia, IEEE Computer Society, pp. 271-283, 20August 01.  (2.6 MB)
Jagode, H., J. Dongarra, S. Alam, J. Vetter, W.. Spear, and A. Maloney, A Holistic Approach for Performance Measurement and Analysis for Petascale Applications,” ICCS 2009 Joint Workshop: Tools for Program Development and Analysis in Computational Science and Software Engineering for Large-Scale Computing, vol. 2009, Baton Rouge, Louisiana, Springer-Verlag Berlin Heidelberg 2009, pp. 686-695, 20September 05.  (3.96 MB)
Supinski, B. R. de, S. Alam, D. Bailey, L. Carrington, C. Daley, A. Dubey, T. Gamblin, D. Gunter, P. D. Hovland, H. Jagode, et al., Modeling the Office of Science Ten Year Facilities Plan: The PERI Architecture Tiger Team,” SciDAC 2009, Journal of Physics: Conference Series, vol. 180(2009)012039, San Diego, California, IOP Publishing, 20September 07.  (906.39 KB)
Jagode, H., A. YarKhan, A. Danalis, and J. Dongarra, Power Management and Event Verification in PAPI,” Tools for High Performance Computing 2015: Proceedings of the 9th International Workshop on Parallel Tools for High Performance Computing, September 2015, Dresden, Germany, Dresden, Germany, Springer International Publishing, pp. pp. 41-51, 2016. DOI: 10.1007/978-3-319-39589-0_4  (565.14 KB)
Journal Article
Jagode, H., A. Danalis, and J. Dongarra, Accelerating NWChem Coupled Cluster through dataflow-based Execution,” The International Journal of High Performance Computing Applications, vol. 32, issue 4, pp. 540--551, 2018-07. DOI: 10.1177/1094342016672543  (1.68 MB)
Jagode, H., A. Danalis, and J. Dongarra, Accelerating NWChem Coupled Cluster through Dataflow-Based Execution,” The International Journal of High Performance Computing Applications, pp. 1–13, 2017-01. DOI: 10.1177/1094342016672543  (4.07 MB)
Terpstra, D., H. Jagode, H. You, and J. Dongarra, Collecting Performance Data with PAPI-C,” Tools for High Performance Computing 2009, 3rd Parallel Tools Workshop, Dresden, Germany, Springer Berlin / Heidelberg, pp. 157-173, 20October 05. DOI: 10.1007/978-3-642-11261-4_11  (4.45 MB)
Jagode, H., A. Danalis, R. Hoque, M. Faverge, and J. Dongarra, Evaluation of Dataflow Programming Models for Electronic Structure Theory,” Concurrency and Computation: Practice and Experience: Special Issue on Parallel and Distributed Algorithms, vol. 2018, issue e4490, pp. 1–20, 2018-05. DOI: 10.1002/cpe.4490  (1.69 MB)
Alam, S., R. F. Barrett, H. Jagode, J. A.. Kuehn, S. W. Poole, and R.. Sankaran, Impact of Quad-core Cray XT4 System and Software Stack on Scientific Computation,” Euro-Par 2009, Lecture Notes in Computer Science, vol. 5704/2009, Delft, The Netherlands, Springer Berlin / Heidelberg, pp. 334-344, 20September 08.  (312.74 KB)
Haidar, A., H. Jagode, P. Vaccaro, A. YarKhan, S. Tomov, and J. Dongarra, Investigating Power Capping toward Energy-Efficient Scientific Applications,” Concurrency Computation: Practice and Experience, vol. 2018, issue e4485, pp. 1-14, 2018-04. DOI: 10.1002/cpe.4485  (1.2 MB)
Jagode, H., S. Moore, D. Terpstra, J. Dongarra, A. Knuepfer, M. Jurenz, M. S. Mueller, and W. E. Nagel, I/O Performance Analysis for the Petascale Simulation Code FLASH,” ISC'09, Hamburg, Germany, 20September 06.  (88.88 KB)
Jagode, H., A. Danalis, H. Anzt, and J. Dongarra, PAPI Software-Defined Events for in-Depth Performance Analysis,” The International Journal of High Performance Computing Applications, 2019.  (442.39 KB)
Jagode, H., A. Knuepfer, J. Dongarra, M. Jurenz, M. S. Mueller, and W. E. Nagel, Trace-based Performance Analysis for the Petascale Simulation Code FLASH,” International Journal of High Performance Computing Applications (to appear), 20October 00.  (887.54 KB)
Poster
Kasichayanula, K., H. You, S. Moore, S. Tomov, H. Jagode, and M. Johnson, Power-aware Computing on GPGPUs , Gatlinburg, TN, Fall Creek Falls Conference, Poster, 20November 09.  (2.89 MB)
Presentation
Danalis, A., H. Jagode, and J. Dongarra, Does your tool support PAPI SDEs yet? , Tahoe City, CA, 13th Scalable Tools Workshop, 2019-07.  (3.09 MB)
Danalis, A., H. Jagode, and J. Dongarra, PAPI: Counting outside the Box , Barcelona, Spain, 8th JLESC Meeting, 2018-04.
Danalis, A., H. Jagode, and J. Dongarra, PAPI's new Software-Defined Events for in-depth Performance Analysis , Dresden, Germany, 13th Parallel Tools Workshop, 2019-09.  (3.14 MB)
Jagode, H., A. Danalis, and J. Dongarra, PAPI's New Software-Defined Events for In-Depth Performance Analysis , Lyon, France, CCDSC 2018: Workshop on Clusters, Clouds, and Data for Scientific Computing, 2018-09.
Haidar, A., H. Jagode, A. YarKhan, P. Vaccaro, S. Tomov, and J. Dongarra, Power-Aware HPC on Intel Xeon Phi KNL Processors , Frankfurt, Germany, ISC High Performance (ISC17), Intel Booth Presentation, 2017-06.  (5.87 MB)
Danalis, A., H. Jagode, and J. Dongarra, Software-Defined Events through PAPI for In-Depth Analysis of Application Performance , Basel, Switzerland, 5th Platform for Advanced Scientific Computing Conference (PASC18), 2018-07.
Danalis, A., H. Jagode, D. Barry, and J. Dongarra, Understanding Native Event Semantics , Knoxville, TN, 9th JLESC Workshop, 2019-04.  (2.33 MB)
Jagode, H., A. Danalis, and J. Dongarra, What it Takes to keep PAPI Instrumental for the HPC Community , Collegeville, MN, The 2019 Collegeville Workshop on Sustainable Scientific Software (CW3S19), 2019-07.  (3.29 MB)
Danalis, A., H. Jagode, and J. Dongarra, Is your scheduling good? How would you know? , Bordeaux, France, 14th Scheduling for Large Scale Systems Workshop, 2019-06.  (2.5 MB)
Tech Report
Jagode, H., Dataflow Programming Paradigms for Computational Chemistry Methods,” Innovative Computing Laboratory Technical Report, no. ICL-UT-17-01, Knoxville, TN, University of Tennessee, 2017-05.
Jagode, H., A. Danalis, H. Anzt, I. Yamazaki, M. Hoemmen, E. Boman, S. Tomov, and J. Dongarra, Software-Defined Events (SDEs) in MAGMA-Sparse,” Innovative Computing Laboratory Technical Report, no. ICL-UT-18-12: University of Tennessee, 2018-12.  (481.69 KB)
Jagode, H., J. Hein, and A. Trew, Task placement of parallel multi-dimensional FFTs on a mesh communication network,” University of Tennessee Computer Science Technical Report, no. UT-CS-08-613, 20August 01.  (2.33 MB)
Jagode, H., A. Knuepfer, J. Dongarra, M. Jurenz, M. S. Mueller, and W. E. Nagel, Trace-based Performance Analysis for the Petascale Simulation Code FLASH,” Innovative Computing Laboratory Technical Report, no. ICL-UT-09-01, 20September 04.  (887.54 KB)